Gene Sfri_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0862 
Symbol 
ID4278690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1013523 
End bp1014809 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content47% 
IMG OID638133628 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_749553 
Protein GI114562040 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA TTATTTGTAG CAGTGCATTA GAGGCCGTGT CCTTAATTGA AAATGGTGAA 
ACCTTGTGGA CTCATTCCAT GGGGGCTACG CCCAAATTAC TGCTCGATGC GTTAGCCCAA
CATGCGTTAA CTAAGCATGG TTTAACACTA TTGCAGTTGC ATACCGAGGG TGCAGAGTCG
TTAAGTGATC CCCGTTTAAA GGATCATCTA CGCCATCGTT GTTTCTTTGC TGGCACACCC
ACGCGCTCGC TGTTGCAACA AGGTGATGCC GATTATGTGC CAATTTTCCT CTCTGAGGTG
CCCAAGTTGT TTCGTTCCGG CGAACAGCAT ATCGACACTG CTATCGTTCA AGTTTCCCCA
CCAGATAAAC ATGGTATCTG TTCGTTAGGT ATATCGGTTG AGGCAACGTT AGCGGCCTGC
CAAATGGCGG GTAAAATTAT TGCTCATATT AATCCTATGA TGCCTCGCAC CCATGGTGAC
GGTTTTATTC ATTACAATAA GTTCGCTGCC GTGTATGAGC AGAGCATGCC TTTACCACAA
CATCTATTCG CCCCAAGCGA TGCGATAAGC TTGGCTATCG GCCAGAATGT GGCCAAATTA
GTACTTGATG GCGCTTGCTT ACAAATGGGC ATTGGCGCCA TTCCAGATGC TGTATTGGCG
TGCTTAACCG AACATAAAGA TTTGGGCGTT CATACTGAGC TATTTTCTGA TGGTGTGCTT
AATTTGGTCG AGCTTGGTGT GATCAATAAT AGTCGTAAGA AAGTCCATCC CGGCAAGACG
GTGACAGGCT TTGCATTGGG TAGCCAACGA CTTTATGACT TTGTTGATGA CAATCCTTCG
GTGATATTCA TGGATATTGA GCAGGTTAAT GACACGGCTA TTATCCGCAA AAATCCGAAT
GTAATGTCAA TAAACTCCGC GTTACAGGTC GATATTTCAG GGCAGGTGTG TGCTGATTCA
CTGGGCACTC AAATATACTC AGGTGTAGGT GGTCAGATGG ACTTTATACG CGGCGCAGGC
CTTTCTGAAG GCGGCCGTTC TGTCATCGCA TTGCCCAGTA CTGCGGCTAA TGGCATAGTG
TCACGGATTG CCACAGTATT ATCCCCTGGC GCTGGCGTGG TAACCACCCG TGCGCATGTA
CACTATATCG TCACAGAGTA TGGAACCGCT TATCTACGCG GTAAGTCGTT ACGAGAACGA
GCCCGTGCGC TTATCGATAT TGCCCACCCC AAATTTAGAG AGCAGCTTTG CCAAGAAGCT
TTTGAGATGT GGCGACTTAA GGTTTAA
 
Protein sequence
MKPIICSSAL EAVSLIENGE TLWTHSMGAT PKLLLDALAQ HALTKHGLTL LQLHTEGAES 
LSDPRLKDHL RHRCFFAGTP TRSLLQQGDA DYVPIFLSEV PKLFRSGEQH IDTAIVQVSP
PDKHGICSLG ISVEATLAAC QMAGKIIAHI NPMMPRTHGD GFIHYNKFAA VYEQSMPLPQ
HLFAPSDAIS LAIGQNVAKL VLDGACLQMG IGAIPDAVLA CLTEHKDLGV HTELFSDGVL
NLVELGVINN SRKKVHPGKT VTGFALGSQR LYDFVDDNPS VIFMDIEQVN DTAIIRKNPN
VMSINSALQV DISGQVCADS LGTQIYSGVG GQMDFIRGAG LSEGGRSVIA LPSTAANGIV
SRIATVLSPG AGVVTTRAHV HYIVTEYGTA YLRGKSLRER ARALIDIAHP KFREQLCQEA
FEMWRLKV