| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0858 |
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| Symbol | |
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| ID | 4278686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1005955 |
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| End bp | 1007244 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133624 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_749549 |
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| Protein GI | 114562036 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAT TATATCAATA TCACTTAAGC CGTTTAGTAA AGGCGCGAAT AAAGCTCAGC
CAAAATCTAT TACTGACTTT GGGCTTAAGT TTAGGCTTGG GTTTATTCGC CTGTTCCAGC
AACGCGGCTG ATGAGGCTGG TAGCAACAGT AGCGACATCG AACGCGGTGC TTATCTGATG
AAGATTGGCG ACTGTGTGGC CTGCCATACA GCGGTAGGCG GACGAGAGTT AACCGGTGGA
CTGCCATTTG AAACCCCGTT TGGGGCGGTA TATTCAACCA ATATCACCTC AGATAAAGAT
ACCGGAATTG GCAAATACAG TTATGACGAT TTTTTTGATG CTATGCATCA TGGCGTCGGC
GTTAACGGTA ATTTGTATCC AGCCATGCCT TACACCTCTT ACAGCCTGTT AACGGATGAA
GATACCAAAG CGATATATGC TTATTTGATG AGCACTAAAC CCATCAAGCA AGCTAATCTC
GACAATGATG TCTCTTTTCC TTTTAACGTT CGATTTGGCC TGAAGGCGTG GAACTTAATC
GCCCATGATG CTGAAAAGTT TGCACCGAAA AAAGACAAAA GTGAGCCTTG GAACCGAGGT
AATTACTTAG TCAATGCGCT AGGTCATTGC GGTGAATGCC ATACTCCTCG AGACAGCTTA
TTTGCCATGG AGCAAGATAA GCATTTTCAA GGCGCTGTTA TCGAAGGTTT AGAGGCATCA
GATATTACTC CTGCTGAACT TAACCGACAA AACTGGACTC ATGATGATTT AAAGTCTTTG
TTTACTGAAG GTTATTCTCG CAAAGGTACG GTATTTGGTG GCATGTATCC TGTGGTTTAC
CACAGTTTTA GCCACTTAAC TGATGCCGAC ATGCATGCCG TAAGCAGTTA TCTGCTTGAT
ACTGACGAAA CCGTTGCAGC TAAAGCGCTG ACCTTTAATG GCCACCAGCG TGAATTACCA
GGATATAACC TATACATGGG ATATTGCGCT GGATGTCATG GTCAAAATGG TGAAGGTCGA
CCTAATGTTG CTCCGGCAAT GGCCGGTAAC GCCACATTAG ATAAAGCTAG CCCACATAAT
GTTGTCGCGG TAATGCTTAA AGGTATAAAG AGCCAACATT ACAATACCAC CACCAGCTTT
TATGCCATGC CTGGTTATGC CGATCAGTTA AGTGATGAAC AGCTTAAAGA CTTAAGCAAT
TATCTGCGCG TCACATGGAG TAATCAGCCA GGCGATGTAG GTGTGGATAC AATTCATGAT
TTAAAAGAAG TGATATTCGA ACACGATTAA
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| Protein sequence | MKPLYQYHLS RLVKARIKLS QNLLLTLGLS LGLGLFACSS NAADEAGSNS SDIERGAYLM
KIGDCVACHT AVGGRELTGG LPFETPFGAV YSTNITSDKD TGIGKYSYDD FFDAMHHGVG
VNGNLYPAMP YTSYSLLTDE DTKAIYAYLM STKPIKQANL DNDVSFPFNV RFGLKAWNLI
AHDAEKFAPK KDKSEPWNRG NYLVNALGHC GECHTPRDSL FAMEQDKHFQ GAVIEGLEAS
DITPAELNRQ NWTHDDLKSL FTEGYSRKGT VFGGMYPVVY HSFSHLTDAD MHAVSSYLLD
TDETVAAKAL TFNGHQRELP GYNLYMGYCA GCHGQNGEGR PNVAPAMAGN ATLDKASPHN
VVAVMLKGIK SQHYNTTTSF YAMPGYADQL SDEQLKDLSN YLRVTWSNQP GDVGVDTIHD
LKEVIFEHD
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