| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0846 |
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| Symbol | |
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| ID | 4276943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 993827 |
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| End bp | 994324 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133612 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_749537 |
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| Protein GI | 114562024 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.680464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCGCAA TAGCGGTTAC TGGATGCAAG CAGGCATTCC AGCAACTCTA TAGCCGCCAT
CATAAGCGGG TTTACGCCAT TTGCTTTAGA TTGAGTGGCC AAGCTCATCT TGCTGACGAT
ATGACTCAAG TCTGTTTTAT ACGCTTATGG CATAAATTGG ACCAATTCAG AGGCGACAGC
CAATTTACCA CTTGGCTGCA TCGGTTGTGC GTCCGTCAAG CGATTAACGA GCTAAAGGTA
CAGCAATCGT GGTGGCGACG TTTTATACCG ACAGAGCAAC TTGAGCCGCA GGACATACCC
ACGGTTGCCT TTGATGAGTA TCACCAATTG GATAAATGTA TTGCAAAGTT ACCTCAACGG
ACTCGTATCG TATTTGTACT GTGTGCGATT GAAGGTTATC AACATAAAGA AATTGCCGCC
CTACTCAACA TTGCCGAGGG CACCAGTAAA GCGCAGTACC ATAATGCTAA ACAATTTTTG
CAGGAGATGC TTGCATGA
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| Protein sequence | MVAIAVTGCK QAFQQLYSRH HKRVYAICFR LSGQAHLADD MTQVCFIRLW HKLDQFRGDS
QFTTWLHRLC VRQAINELKV QQSWWRRFIP TEQLEPQDIP TVAFDEYHQL DKCIAKLPQR
TRIVFVLCAI EGYQHKEIAA LLNIAEGTSK AQYHNAKQFL QEMLA
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