| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0844 |
|---|
| Symbol | |
|---|
| ID | 4276941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 992287 |
|---|
| End bp | 993225 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638133610 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_749535 |
|---|
| Protein GI | 114562022 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3595] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00516846 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTC TTAAATACGT GTTAATCGTG CCGTTAATCG GTATCAGTTT TATCTCAATG
GCCAAAGAAG CCGTTGACCA ACAATTAAGT GTTTCTGATA ACCCTTCTGT CAGCATGAAA
ATACAACGCG GTAATGTTGA GCTAGTCAGT TGGGATAAAA ATAGCATTCA AGTAAAAGGT
GAACTTGATG AGTTAAGCCA AGGCTTAACA TTTGAAGTTA AAGGCAATAG CGTTATTGTA
GAAGATAAAT TACCACGCAG TTATCAAGGC AGTAATAAAC AAGGATCACA ACTGACCATT
TACCTGCCTA AAAAACTTGC TTTAGATGCC GAGGGAGTAT CAGCCAGTTA TCAATTATCA
CAGCTAAATG GCCAAATATC GTTAGCGTTA GTCAGCGGCA ACATTAACGC CCAACAACTT
AGTGGCAATA CTAAACTCAC CACGGTGTCA GGCAATATTA ATACCTCTGA GTTAACGGGA
AAAATTAACC TAGAAACGGT ATCGGGCGAT ATCACTGACA ACAATAGCCA CGGCGAAGCT
GAGCTGCGCT TAGTGAGTGG CGAACTGAAA AGTCAAAGTG CCTTTACGCA ATTGTCTGTC
GACCAAGTGT CTGGTGATAT CACCGCAACA GTTAGCCAAG TCACTGAGTT AAACATTGTT
ACCATCAGTG GTGATGCACA AATAACCTTA GGGGCCGATT TAAACAAAGC TCAACTCGAA
ACCATAAGTG GAGATATGGC GCTAACGTTT ACGGCTATGC CTAACATCAG TTTTATGATT
GATGGCGGCC CTGGTGGAAA AATTGACAAT CAATTAACCG ATGATAAACC GCTAAAACAA
AAATACTCAC CAGCCAAAAC GTTGCAGTTC AAAACTCAAG CTGGCACAGG TCAAGTCAAC
ATCAATACCA TTAGTGGCAA AATTAGCCTA ACTCAATAA
|
|---|
| Protein sequence | MSILKYVLIV PLIGISFISM AKEAVDQQLS VSDNPSVSMK IQRGNVELVS WDKNSIQVKG
ELDELSQGLT FEVKGNSVIV EDKLPRSYQG SNKQGSQLTI YLPKKLALDA EGVSASYQLS
QLNGQISLAL VSGNINAQQL SGNTKLTTVS GNINTSELTG KINLETVSGD ITDNNSHGEA
ELRLVSGELK SQSAFTQLSV DQVSGDITAT VSQVTELNIV TISGDAQITL GADLNKAQLE
TISGDMALTF TAMPNISFMI DGGPGGKIDN QLTDDKPLKQ KYSPAKTLQF KTQAGTGQVN
INTISGKISL TQ
|
|---|
| |