| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0833 |
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| Symbol | |
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| ID | 4276930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 978865 |
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| End bp | 980553 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133599 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_749524 |
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| Protein GI | 114562011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATA ACAAACGCCC CCTCTATCTT CCTTTTGCCG GCCCAGCGAT TCTTGAATCA
CCTCTGCTTA ATAAAGGCAG TGCATTTAGT GAAGAAGAAC GAATTTATTT CAACCTCGAA
GGCCTCATTC CTTGGGTAAT TGAAACCATT GATGAGCAAG CCGCTCGCGC TTACGCACAA
TTTAAAAACT TCACCAATGA TCTCGATAAG CACATTTATT TGCGCAATAT TCAGGATACT
AACGAAACCT TATTTTATCG TTTAGTGCGT AATAACATCA GTGAAATGAT GCCGATTATC
TACACGCCTA CAGTCGGCTT AGCCTGTGAA CGCTTCTCTA AAAATTACCG TCGTAATCGT
GGCTTATTCA TTTCGTATCC TAACAAAGAT CGCATTGATG ATATTTTAAA TAACTCGACT
CGCCATAAAG TCAAAGTCAT CGTGGTGACA GACGGAGAAC GTATTCTCGG TTTAGGCGAC
CAAGGCATAG GCGGTATGGG GATCCCAATT GGTAAATTAT CGCTATACAC TAGTTGTGGT
GGCATAAGCC CGGCGTATTG TCTTGCTGTG ACGTTAGATG TTGGTACTGA TAACCCACAA
CTTCTTGAAG ACCCTATGTA TATGGGCTGG CGTCATCAAC GTATTGGCGG CGATGAATAT
GCTGAATTTG TTGAAGAATT TATGCAAGCA GTCAGCCGTC GCTGGCCTGA TGCATTAATT
CAGTTCGAAG ATTTTGCACA AAAAAATGCC ATGCCATTAC TTGAGCGTTA TAAAGATCAA
TATTGCAGTT TCAATGATGA TATCCAGGGC ACGGCAGCCG TTACGGTTGG CTCACTATTG
GCTGCTTGTA AAGCCGCTAA CAGTAAACTC AGCGAGCAAC GCATCACCTT CTTAGGTGCG
GGTAGCGCAG GTTGCGGTAT TGCCGAAGCG ATTGTGGCGA CAATGGTGTC TGAGGGCATT
AGCGATCAAC AAGCTCGCTC ACAAGTATTT ATGGTCGATC GTTGGGGCTT ATTACTCGAT
AATATGCCTA ACCTACTCCC TTTCCAACAG AAGCTAGCTC AACCTTGTGC CACGATAGAA
GCATGGGACA ATTACAGTGA CAATATCTCG TTACTTGATG TAGTTAACAA TGCTAAACCA
ACGGTACTTA TCGGAGTATC AGGCTCTCCA GGGTTATTTA CTGAAGAAAT CATTAAGGCA
ATGCACAGCC ATTGTAAACG TCCGATAGTA TTCCCATTAT CGAATCCGAC AAGCCGTGTA
GAAGCGACTC CTAAGGACAT CCTTAATTGG ACATCGGGCC AAGCACTCGT GGCAACGGGC
AGCCCATTTG AACCAGTAAT AGTCAATGGC GAAACTTTTG AGATAGCGCA GTGTAATAAT
AGCTTTATCT TCCCAGGTAT TGGCTTAGGT GTATTATCTT GTGGTGCAAG ACGTGTATCT
GATGAAATGT TAATGGCTTC AAGTCGTGCT TTAGCGGAAT GTTCACCATT AGGTAAAGAC
GGTGTTGGCT CGCTATTACC TCGCCTTGAA GATATTCAAA CTGTTAGTAA ATATATTGCT
TTTGCTGTTG CTAAAGCAGC TATTGATCAA GGTTTAGCAT TACCTTGTAC CGATGAGTTA
CTGCAACAAT CTATTGAGGC TAACTTCTGG GAACCTGAAT ATCGTCGTTA CAAACGTACC
TCATTCTAA
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| Protein sequence | MDDNKRPLYL PFAGPAILES PLLNKGSAFS EEERIYFNLE GLIPWVIETI DEQAARAYAQ
FKNFTNDLDK HIYLRNIQDT NETLFYRLVR NNISEMMPII YTPTVGLACE RFSKNYRRNR
GLFISYPNKD RIDDILNNST RHKVKVIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYCLAV TLDVGTDNPQ LLEDPMYMGW RHQRIGGDEY AEFVEEFMQA VSRRWPDALI
QFEDFAQKNA MPLLERYKDQ YCSFNDDIQG TAAVTVGSLL AACKAANSKL SEQRITFLGA
GSAGCGIAEA IVATMVSEGI SDQQARSQVF MVDRWGLLLD NMPNLLPFQQ KLAQPCATIE
AWDNYSDNIS LLDVVNNAKP TVLIGVSGSP GLFTEEIIKA MHSHCKRPIV FPLSNPTSRV
EATPKDILNW TSGQALVATG SPFEPVIVNG ETFEIAQCNN SFIFPGIGLG VLSCGARRVS
DEMLMASSRA LAECSPLGKD GVGSLLPRLE DIQTVSKYIA FAVAKAAIDQ GLALPCTDEL
LQQSIEANFW EPEYRRYKRT SF
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