| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0826 |
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| Symbol | |
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| ID | 4278779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 972733 |
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| End bp | 973635 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133594 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749519 |
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| Protein GI | 114562006 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAGC TTAGACACCT TCGCACCTTG ATGGCGTTAA AGGAAAGTGG CAGTTTAGCG
GGTGCAGCTA AAAAAAGGTT TGTAACCCAG TCGGCGCTTT CTCATCAAAT AAAAGAGTTA
GAAACACGGA TAAACTCAAC TATTTTTGTG CGTAAGAGCA AACCATTGAC GTTTACTCAC
GAAGGTTCAC GTCTGCTGAA TTTAGCGGAA GAAATCTTAC CGAAAGTGAT TGCAACCGAG
TCGGATCTTA AACGCGGTTT AGAGAGTGAA AGCCAACAAC TTAAGCTTGG CATTGAATGC
CACAGTTGTT TTCGTTGGTT AATGCCTGTT ATTGAGCAAT TTAAACAACA TGCACCAGCA
GCTCAAATTG ACATTTCGAG TCGTCATTTA TTTGATTCAC TCAATGCATT GGAAACAGGC
AGTTTAGACA TAGTGCTAAC ATCAGACCCT GTGCCAGGAC ATAGCGTCGC TTATCAGCAT
TTATTTGATT TTGAAGTAAA ATTAATTGTT GCCAGTGATA ACGAATTAGC GGCACAAGCG
TTTGTCACGC CAGCGCAATT GGCAAAGCAA ACATTAATTA GTTACCCCGT GCCTTTAGCG
CGTTTAGACA TATACAAACA CTTTTTAGAG CCTGCTGGTA TTGAACCTGG CGAGCAAAAA
CAGTGTGATT TAACCTCAAT GTTATTGCAA CGAGTTGCCT GTAATGACGG CGTAGCAACC
CTACCAACTT GGTCTATCCG AGAGAGTCAG GGGCTAAGCC TTACTGCGGT TAAATTAGGA
TCGGAAGGCC TGAAACGTCC ATTATTTGGG GCTTATCGTC GCGACGCCAC TAATGCAAAT
TTAATCCAAA AGTGGCTCGA ACTGGTAGCG AGTGAAGGCA TAAATCTACA ACGGGTTGAT
TAA
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| Protein sequence | MIELRHLRTL MALKESGSLA GAAKKRFVTQ SALSHQIKEL ETRINSTIFV RKSKPLTFTH
EGSRLLNLAE EILPKVIATE SDLKRGLESE SQQLKLGIEC HSCFRWLMPV IEQFKQHAPA
AQIDISSRHL FDSLNALETG SLDIVLTSDP VPGHSVAYQH LFDFEVKLIV ASDNELAAQA
FVTPAQLAKQ TLISYPVPLA RLDIYKHFLE PAGIEPGEQK QCDLTSMLLQ RVACNDGVAT
LPTWSIRESQ GLSLTAVKLG SEGLKRPLFG AYRRDATNAN LIQKWLELVA SEGINLQRVD
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