Gene Sfri_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0820 
Symbol 
ID4278773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp965302 
End bp965868 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content38% 
IMG OID638133588 
Producthypoxanthine-guanine phosphoribosyltransferase 
Protein accessionYP_749513 
Protein GI114562000 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AACATTATAT TAGTGCGCAA CAACTGCTGG AAGATTCATT TAGACTCGCT 
GCGCAAGTAT ATGACAGTGG CTTTCGACCA CAGTTTATCG TGGGTATTTG GCGCGGTGGT
GCTCCAATCG GTATTGCAGT CCAAGAGTAT TTTGATTTTA AAAAAGTTGA AACCGATCAT
ATAGCCGTTA GAACGTCTTC TTATTATGGT ATCGGCACTG ACAAACAAGA TAAAAATATC
AAAGTACACG GTTTGCATTA CATTATTGAA AACGCCAATG CTAGCGATGG TTTGTTGATT
GTTGATGACG TTTTTGACTC TGGCCGCAGT ATTGATGCGC TGATTGGAAA ATTAAGAAAG
TTCATGCGTT TAAACATGCC TACAGATATC CGGATCGCAT GTCCTTATTA CAAGCCAAAA
AACACTAAAG TAGAGCTAAA ACCAGATTAT TTTATTCATT CATCTGAAGA TTGGTTAGTG
TTTCCCCATG AAGTGTCTGG GCTTAATCCG CAAGAAATTG CTGAAGGCAA AGCTGACTTT
AAAAACATCC AAGAATTATT TTTATAA
 
Protein sequence
MTDKHYISAQ QLLEDSFRLA AQVYDSGFRP QFIVGIWRGG APIGIAVQEY FDFKKVETDH 
IAVRTSSYYG IGTDKQDKNI KVHGLHYIIE NANASDGLLI VDDVFDSGRS IDALIGKLRK
FMRLNMPTDI RIACPYYKPK NTKVELKPDY FIHSSEDWLV FPHEVSGLNP QEIAEGKADF
KNIQELFL