| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0802 |
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| Symbol | |
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| ID | 4277898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 946091 |
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| End bp | 947056 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133570 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_749495 |
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| Protein GI | 114561982 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCTTG AAATCGTTGG ATTATTAATT TTCATTTTAT TGTTAGCTAT CGCTTTGTTG
CTGTTTGTGA ACTTAAACCG ATACCGTCAG CAGCAAACTA AAAAGATGAT GTTAGATACC
TATGAGCTTA TCCTTGATCA AGTTGATGCT TATATTTATT TAAAAGACAC TCAATGCAAA
TATGTTTATG CGAATCAACT GACGCTAGAT TACTTTGGCG TGACGCTTGA AAAGCTAAAG
GGCACTTCCG ATAGCGATTA CTTTCCCGCG AATGTTGTAG ATATATTGCA CGTGAATGAC
ACTAAAGTGC TTAATTCTCA AAGCAAACTA TCTGACGATA TTATTGTTGA TACCCCAGCT
TCGCTAATTG TATATCACGA AGTTAAACAA CCCTTATATA ACCACAAAGG CACATTAATT
GGCCTTATTG GTATTTCTAC CGATATTACT GCTGCTTATC ATTTACGTTC AAAATTAGAG
CGGCTTGCTA ATACCGATCC GTTAACGGGT TTGTTTAATC GTCGTTCATT TACGTCTTTT
TGCGAACATG AGTTTTTTCG TGCTACTCGC TATTTTCAAC CATTCTCATT AATGATTATT
GATATTGATT TATTCAAAAA AGTGAATGAT ACCTATGGCC ATTTAGTGGG GGATGAGGTG
ATTAAGCGCG TTGCCAATAT ATGCAATGAA CATGTTAGGG AGGCAGATGT ATTGGCTCGA
ATTGGCGGTG AAGAGTTTGC TATTTTATTA CCCGATACTG ATATTGACTC TGCTTATGTC
CTGGCTGAAC GGTTAAGAGA GGCTCAGCAA CAGTACGAAG AACAAAAAAC TCCTTCGATA
ACCATTAGTA TTGGCGTTGC AACCTTACGT TCTCAGGATA AAGCATTCTT AGAGATATTT
AAGCGGGCAG ATAAAGCGTT GTATTCATCA AAAAATGTCG GTCGCAATAG TGTCAATGTC
GCGTAA
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| Protein sequence | MSLEIVGLLI FILLLAIALL LFVNLNRYRQ QQTKKMMLDT YELILDQVDA YIYLKDTQCK
YVYANQLTLD YFGVTLEKLK GTSDSDYFPA NVVDILHVND TKVLNSQSKL SDDIIVDTPA
SLIVYHEVKQ PLYNHKGTLI GLIGISTDIT AAYHLRSKLE RLANTDPLTG LFNRRSFTSF
CEHEFFRATR YFQPFSLMII DIDLFKKVND TYGHLVGDEV IKRVANICNE HVREADVLAR
IGGEEFAILL PDTDIDSAYV LAERLREAQQ QYEEQKTPSI TISIGVATLR SQDKAFLEIF
KRADKALYSS KNVGRNSVNV A
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