| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0791 |
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| Symbol | |
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| ID | 4278708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 927858 |
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| End bp | 928715 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133559 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_749484 |
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| Protein GI | 114561971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACAA ATGTGATTGC CTGTATCGAC GGTTCAAAAG CAACACGCGC GGTATCTGAT
GCTAGTGGGT GGGCGGCTAT GCAGTTGAAC GCCCCTGTGA CGTTATTACA TGTATTGGAT
AAGTCTGCCT ATCCTACAGA GTTAAATCTG TCGGGAAATA TTGGCCTTGG TAGCCGAGAG
CATTTACTTG CTGAGATGGT TGAACTTGAA GGGCGCATGA GTAAACTCGC GCTCGAACAA
GGTAAATATA TGCTACAAGA TGCTCAAACG AGCATTGTAG CGGCGCAACC TACTGTGACG
GTGCAAACAC TGCAGCGCCA TGGGGATTTA GTGGAAACGC TGCTTGAGCA AGAAGCTGAT
GCCAGACTGG TGGTTATTGG TCGTCAAGGT GAGCAGCATC AAGATCAAGC GCAAGCGATT
GGCAGTCATT TAGAAAGTGT TATTCGCACG CTTAAGCAGC CGATTTTAGT GGTGATGCCT
GAGTTTGCAA TGCCAAGCCG TTTTATGATC GCTTATGATG GCAGCGCCAC CTCGAAAACA
GTGCTTGAAC GAGTGATTAG CAGCCCACTA CTTAAAGGGC TCGGATGTCA TTTAGTGATG
GTGTCTGACA ATCAGTCTCA AGCGCTAACC GAATTGACCT CGGTTGCAGA CTCTCTTACT
GAAGCTGGTT TTGAGGTAAC AACTGCGGTT TGTCAGGGCG AAGTGCAAAC TGCTCTTGAA
GCTTACCAGC TAGCACACCA AATTGATTTA ATGGTAATGG GTGCTTATGG TCATTCACGT
ATTCGTGAGT TTTTTGTTGG TAGTAACACG ACACGGATGA TCAGTAAAAG CCACATCCCA
TTGTTATTGT TACGCTAA
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| Protein sequence | MMTNVIACID GSKATRAVSD ASGWAAMQLN APVTLLHVLD KSAYPTELNL SGNIGLGSRE
HLLAEMVELE GRMSKLALEQ GKYMLQDAQT SIVAAQPTVT VQTLQRHGDL VETLLEQEAD
ARLVVIGRQG EQHQDQAQAI GSHLESVIRT LKQPILVVMP EFAMPSRFMI AYDGSATSKT
VLERVISSPL LKGLGCHLVM VSDNQSQALT ELTSVADSLT EAGFEVTTAV CQGEVQTALE
AYQLAHQIDL MVMGAYGHSR IREFFVGSNT TRMISKSHIP LLLLR
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