| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0776 |
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| Symbol | |
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| ID | 4277943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 911065 |
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| End bp | 911964 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638133545 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749470 |
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| Protein GI | 114561957 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA TATCTGCTAT ACGCAGCTTT GTTGAAGTGG CCAGTTGTGG CAGCTTTACC
CAAGCGGCCG AGCAACTTGG CTTAAGCCGT TTACAAGTGT CGCGCCATAT CAAAGAAGTT
GAACAATGGT TAGCGTTGCG ATTATTACAC CGCACCACGC GCCGAGTTAG CCTCACCCTA
CAGGGCGAAG AAGCGCTTAA TTATTGCCAA CGCATTTTAA GTGAAGTGAC GGCGATGGAA
AGTCGCGCCA ACAGCCATAA TAATGAACTG GTTGGCAGTA TCCGGATCGC CTCACCCATT
GGCCTTGGGC AACACAAACT GTATGACGTA GTTGAGGCTT TTTGCCAGCA ACATCCTCAA
GTTAATATTC AGCTGTTACT GTCGGATAAT GTCTCGCAAC TGGTGAATGA CAGAGTCGAT
ATTGCGCTGC GTTACACCCA CCAGCCTGAT GAAAGCTTAA TCGCCAGACG CTTAATGCAT
ATCGACAGTG TCATTTGCGC ATCACCTGAC TATCTCGTCA AACATTCAGC CCTATTGTCA
GCCAACGACT TATTACAACA CAACTGTTTA TGCCACTCGA GCCAACCACG TTGGGAGATA
ATCGATGAGT CTCGAACCTG TTTACTTGAT GTGAGCGGTA ATTTACAGGC CAATGACATG
GGTGTATTGA TCAATGCGGC GCTTCGTGGC AACGGCATTG TGTGCTTGCC GACTGATTTA
GCTAACCACT ATCTTGAACA AGGTGAATTG CTTGAAGTGC TGCCCAACAT CACTGCGCCG
GGTAAAACGT TGTGGGCGGT TTATTTGTCG CGTAGTTATC AGCAAACCGT CGTCAGAGCC
TTTATCGACT TTACCGCTAA TGCTTGGCAG CAAGACATTA AAAAATGGCA AGCAAGCTAG
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| Protein sequence | MDKISAIRSF VEVASCGSFT QAAEQLGLSR LQVSRHIKEV EQWLALRLLH RTTRRVSLTL
QGEEALNYCQ RILSEVTAME SRANSHNNEL VGSIRIASPI GLGQHKLYDV VEAFCQQHPQ
VNIQLLLSDN VSQLVNDRVD IALRYTHQPD ESLIARRLMH IDSVICASPD YLVKHSALLS
ANDLLQHNCL CHSSQPRWEI IDESRTCLLD VSGNLQANDM GVLINAALRG NGIVCLPTDL
ANHYLEQGEL LEVLPNITAP GKTLWAVYLS RSYQQTVVRA FIDFTANAWQ QDIKKWQAS
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