| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0773 |
|---|
| Symbol | |
|---|
| ID | 4277940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 907584 |
|---|
| End bp | 908798 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638133542 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_749467 |
|---|
| Protein GI | 114561954 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAA TCGAATCAAT TACCTTAATG CTAGCCTTAG TATATAGCAC CAGCTTACTG
TATTGGGGTG GCAAAAAATG GGGTGCATTG GTCAGCGGGG CATTATTGCT CGGCGCGACT
CTTGCTAGCT TTTTCTGGCC GCTTTTACTC ATATTGTTGG GTGCGGTATT AGTTGTTACC
GCAATAGGAC AATATCAACC TGCGTTTGCC AATGCAGAAG GCCGGCCCAA TGCAGTACGT
GAGATTTGCC AACATTTCTT TGCCCTTTCA ATGTTATTGG TTGGAGTGCA ATATGCCATC
AATGCTGGAT TATTGTATGC TGGAGAAACA CCCTGGTTAA TGAGGCCTGA TGTCGGTGAT
GCATTTTTAC CTATTGCGGG CGGCATAGAA CTCAAAGCTA TTTTAACCCT TGGACTTTGG
GATCAAAACC ATCCTGCTGC TGTAGTGATG CTGTGTGTAG TATTGCTCAC AGGTGTCGTG
TGTAAGCGAG CATTTTGTGG TTGGGCTTGT CCACTAGGAT TAGCAGGTGA GTACCTTTAT
AAACTGAGAA AACGTGTTAT TCATGCAGAG TTATTACCGC CGGCGTGGAT AGACTGGCCA
CTCAGAATGG TTAAATATTT ATTATTAGCG GCACTGCTTT ATTTGGTTAT TTCGATGCCA
TCAGCAAGCA TTCCAAACTA CTTAGCGGGT AATTACCACA AAGTGGCTGA CTTAAAAATG
GCAGTGTTTT TTATGATGCC ATCAATGGTG GCCTTAATCG GTTTTGGAAT GATCTTTGCC
TTAGCCGCAT GGCGTCGCCA AGGTTTTTGC CGTTACATTT GCCCTTATGG CGCGTTGTTG
GGCATTGTAA GTTTTTTAAG CCCGTTTAAA ATTCGTCGTG ATACTCAACA TTGTTTAATT
GAAACCAAAG GCATGAATTG TGATAAGTGC ACTCGTGCCT GCCCTGCCAA TATATCGGTG
CATACTCAAA AAAATATCCG CTCAGACGAA TGCCAAGCTT GCATGCGTTG TGTGTCTGCT
TGCCCTAAAA AACAAGCGCT GCAATTTAGT ACTCGTAATG GTATCCCGCT TTCGGCCAGA
GGATTACTGA TTGTGTTACT GACTATTATG TTTATGTTAC CGCTGTTTGC TTACGTGAGT
GGCTACTGGC ACAGTCAAAC ACCTAGCGCT ATAAAAATGG AACTGATTCA GAAACTGGAC
CGCATTGGTC ATTAA
|
|---|
| Protein sequence | MSTIESITLM LALVYSTSLL YWGGKKWGAL VSGALLLGAT LASFFWPLLL ILLGAVLVVT
AIGQYQPAFA NAEGRPNAVR EICQHFFALS MLLVGVQYAI NAGLLYAGET PWLMRPDVGD
AFLPIAGGIE LKAILTLGLW DQNHPAAVVM LCVVLLTGVV CKRAFCGWAC PLGLAGEYLY
KLRKRVIHAE LLPPAWIDWP LRMVKYLLLA ALLYLVISMP SASIPNYLAG NYHKVADLKM
AVFFMMPSMV ALIGFGMIFA LAAWRRQGFC RYICPYGALL GIVSFLSPFK IRRDTQHCLI
ETKGMNCDKC TRACPANISV HTQKNIRSDE CQACMRCVSA CPKKQALQFS TRNGIPLSAR
GLLIVLLTIM FMLPLFAYVS GYWHSQTPSA IKMELIQKLD RIGH
|
|---|
| |