Gene Sfri_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0765 
Symbol 
ID4277932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp895110 
End bp895778 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID638133534 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_749459 
Protein GI114561946 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATT TAAGCTTAGA TATAATGACG AGTCCACATA CTAGTTCAAA CCCTAAACCG 
CGCAGAGGTA GACCACCTAA AGTATCGCGA GATAATCCTG ATACTCGGGC TGAGCTTATT 
CGTAGTGGTC TTGAACAATT GACAGAGCAA GGTTTTGCCT CATCGGGTAT AGAACCTATT 
TTGAAAAAGG TTGGCGTACC GAAAGGCTCT TTTTATCATT ATTTTGCGAG TAAAGAAGCC 
TTTGGCCAAG CGGTATTGCA GAACTATGCT GAATACTTTT TACATAAACT TGAGATCCAT 
TTGCTCGATG AAGCTTATTT GCCGTTAACG CGAATTAGAC ATTTTGTTGA AGATGCTAAA 
GCAGGAATGA TTCGATACCA ATTTAAACGT GGTTGTTTAG TGGGTAATTT GGGGCAAGAA 
GTGGGCGTTT TACCAGAGAG CTTTAGGCCG CTTATTATCG AGATTTTTTT GAGTTGGCAA 
GCTTGTTTAG CTCGCTGCCT CAAGGCCGCA CAATCACTTG GACAAATCGC TGAAACAACA 
GATTGTGATG CCCTAGCGGA AAGTTTTTGG GTTGGCTGGG AAGGGGCGGT AAGCCGCGCA 
AAGTTAGTTC AAGATGAACG ACCGCTTGAT AACTACTATG ATCATTTTAT GGCAGCGTTA 
CCAAAGTAA
 
Protein sequence
MNNLSLDIMT SPHTSSNPKP RRGRPPKVSR DNPDTRAELI RSGLEQLTEQ GFASSGIEPI 
LKKVGVPKGS FYHYFASKEA FGQAVLQNYA EYFLHKLEIH LLDEAYLPLT RIRHFVEDAK 
AGMIRYQFKR GCLVGNLGQE VGVLPESFRP LIIEIFLSWQ ACLARCLKAA QSLGQIAETT 
DCDALAESFW VGWEGAVSRA KLVQDERPLD NYYDHFMAAL PK