Gene Sfri_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0763 
Symbol 
ID4277930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp891468 
End bp892574 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content43% 
IMG OID638133532 
Productgamma-glutamyl kinase 
Protein accessionYP_749457 
Protein GI114561944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTT CACATTGGAA ACGGATTGTC GTTAAAGTGG GAAGCGCATT AATTGCGCCC 
CATCAACAAG GTTGTAGCAG CCATTATTTA TTAGGTATTG CACAGTTTAT TGCTACCTGT 
CGCGCTCAAG GATGCCAAGT TGTATTGGTA TCTTCAGGTT CAGTTGCCGC TGGTAGACAT 
CGATTCCCTG ATACGGCAGA ACCAAGCATT TCGCTTAAAA AAGCCATGGC AGCAGCAGGC 
CAGGCCGATA TGATGGCCAC TTGGGATAAG TTATTTGATT TCCCTTCGGC GCAGTTATTA 
CTTACCCATG GTGATTTACG CGATCGCGAC CGTTATATCA GCATTAAAAA TACTATTTTT 
ACCCTGTTAG ACAATGGCTT ACTTCCCATT ATCAACGAAA ACGATGCTGT TACCGCAGCC 
AAGTTACGTG TGGGTGATAA TGACAATTTA TCAGCTATGG TCGCCGCAGC AGCGGATGCA 
GATGCGTTAA TTATCTGCTC TGACGTAAAA GGGCTTTATA CTAAAAACCC TAATTTACAT 
GAAGATGCCA CGCTAATTAA GCAAGTCAGT GAAATCAATG CTGAGATTTA TGCTATGGCT 
GGCGGTGCTA CGAGCAGCGT AGGTACTGGT GGCATGTTAA CCAAGATTGA AGCCGCTGAG 
AAAGCGATTT CACACGGAAT TGAAACCATG ATTGTGGATG GTTTTGACGC GGACACATTC 
AATCAACTTT TAAAGGGCCA AAATCCAGGC ACTTTATTCA CCCCGTATGA TGTACCGATG 
CAAGAACACT TGCATTGGAT GATGCATACC TCACAAATTC AAGGTGAGTT AATTGTCGAA 
AATGACTTTA GCGCTGACCT TGAAGAACAT GATACTCAAC TAACCACAGA CGATGTAGTG 
GCCGTAAGAG GCAACTTTTC CGTCGGTGAT ACTGTTTTAG TGCGCAAAGG CGATGGTACT 
AAATTGGCTA AAGCCAAATC AAACTACAGT AGTTGTTTAT TACATTTTAT TGCAGACCAG 
GAAGATCGTG AATTTGCCAA CAATGCCCAG CAAAAAACGG GCCCACTGAT CTCTGACAAA 
AACATCGCCA TTTTGGAGCA ACTATGA
 
Protein sequence
MSTSHWKRIV VKVGSALIAP HQQGCSSHYL LGIAQFIATC RAQGCQVVLV SSGSVAAGRH 
RFPDTAEPSI SLKKAMAAAG QADMMATWDK LFDFPSAQLL LTHGDLRDRD RYISIKNTIF 
TLLDNGLLPI INENDAVTAA KLRVGDNDNL SAMVAAAADA DALIICSDVK GLYTKNPNLH 
EDATLIKQVS EINAEIYAMA GGATSSVGTG GMLTKIEAAE KAISHGIETM IVDGFDADTF 
NQLLKGQNPG TLFTPYDVPM QEHLHWMMHT SQIQGELIVE NDFSADLEEH DTQLTTDDVV 
AVRGNFSVGD TVLVRKGDGT KLAKAKSNYS SCLLHFIADQ EDREFANNAQ QKTGPLISDK 
NIAILEQL