| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0761 |
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| Symbol | |
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| ID | 4277928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 889308 |
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| End bp | 890186 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133530 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_749455 |
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| Protein GI | 114561942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTTTT CTTTTTTAGC GACATTTTCG GAGGTTGTCA TCTCTCAACA TGAATCATTA
GATCCCAATA CCTGTATCGC CTTTATCGGT GGTGGCAACA TGGCAAGAGC CATAATCAGC
GGCCTACTTA AACAAGGTCA TAACAGTGCC AATATTCTAG TGTGCGCCCC CAGCCAAACC
ACCCGACACG ACTTGATCGA TAAATTCAAT GTTAAAGTAC ATCAAGACAA CACCGCTGCC
GTTGCGTTTG CTGATGTCAT CATTGTTGCC GTTAAGCCTT TTGTAGTACC TGTAGTGTGT
GAGCAGTTGA GTGAAGTTAT GCAGTACGAT AACCGTAAAC TCGTTATCTC GATTGCCGCG
GGTGTCAAAC ATGCAACACT CCGCCAAAAA CTGCATTTTT CGCCTAAAGT CATTTGCGCC
ATGCCAAACT TACCGACCGC CATTGGTGAA GGATTAACAG GTTTATATGC AGGCCCAGAC
ACTCACGCTA ATGACATTGC GCTAGCAGAA AGACTCATGC GCGCTGTAGG TGAAACCGTA
TGGTTAAAAG AAGAAAGCCA AATGTCGACC ATCGTGGCGG CTGCGGGTAG CTCACCGGCG
TATTTATTCT TATTTTTAGA AGCCATGGAA AAAGCTGCAA TTGAACAAGG ATTGCCGCCA
GAAATAGCCG CTAAAGCTGT GCTGCAGAGT GCCATGGGAG CTATATCAAT GGCGATGAAC
AGTCAGCATA ATTTGGCAAG TTTACGTCAC CAGGTGACCT CACCTAAAGG CACGACGGAA
CAGGCAATAT TGGCATTTCA GGATGGTGAT CTTGATGATC TAGTTGCCAG CGCAATGGCG
TGCGCAACGA CAAGAGCCAA AGAATTGTCT ATAGGCTAA
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| Protein sequence | MAFSFLATFS EVVISQHESL DPNTCIAFIG GGNMARAIIS GLLKQGHNSA NILVCAPSQT
TRHDLIDKFN VKVHQDNTAA VAFADVIIVA VKPFVVPVVC EQLSEVMQYD NRKLVISIAA
GVKHATLRQK LHFSPKVICA MPNLPTAIGE GLTGLYAGPD THANDIALAE RLMRAVGETV
WLKEESQMST IVAAAGSSPA YLFLFLEAME KAAIEQGLPP EIAAKAVLQS AMGAISMAMN
SQHNLASLRH QVTSPKGTTE QAILAFQDGD LDDLVASAMA CATTRAKELS IG
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