| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0758 |
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| Symbol | |
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| ID | 4278294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 886809 |
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| End bp | 888023 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133528 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_749453 |
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| Protein GI | 114561940 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.017578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTTC GGAAATTGCT TATGATTAAA TATTGGTACA AACAATTCTC TCAGTATCCA
CCTGATCACC CTGATTATTG GCGTATCCGT TTAATCGAGC ATTCGTTACT CATTACCACG
AGTTACTTTA TCATTCTGAC TCTGATCAAC TTGTTCTATT TTGAAGGTTA TCAATATGCC
TTACTCGACG GTTCAGGCTT AGTTATTTCA TTGGGCATTT ACTATCGATT TCGCAGTACG
GGACATGTAA AGATAACCGC ATGGGCTGTT ACTCTCATGG TAGCCAGTTT GATTATGTTA
TTTGTGATAT CGACCAAGGG ATATTCTCAT TCACTGTTTT GGGCGACTCT TATTCCGCCT
TTTTCATTTT TTCTTATCGG ACGAACCTGG GGCACATTTA TTTCATGTAT CTGCTTTAGT
GTGTGTGCTT TTCTCGTTTA CCTGCAAACG CAGAATCCTC AACCTGTGAC GTTTAGCAAA
GGTTCATTAT TCAACGTTAT TGAAGTGTGT GTTGCGCAAA TTTTACTGTT TAGGTTTTAC
GAAAAAACCC GCTTTTCCGC TTATAAAAAA CTGGCATTAC GTAATTTAGA AATTCAAAAA
ATGGCTGAAA CCGATAAACT CACCGGACTA TATAACCGTG AAAAACTCGA TTTCGCGCTT
GATACACTGC TGACCACACC AGCAGCTAAT ACCTCTATGA CAACAGAGAC TACTAACGCG
ATAAAACAAA CAGACGAAGC ACCGATTATT TACCAGCCTT ATGCCGATGA CCATCCACTG
ACAAACCATC AAACCACTCA AGATTTACTC AGTAAACAAG CCGTCACTCA ATACCCTATT
TCTGTGGCGA TTATCGACAT CGATCATTTT AAGCAAATTA ATGATAATCA CGGCCATTTA
ATCGGAGACA AAGTGCTATG CCAACTCGCG CAGTTATTGC AAAACCAAAT GCGCAACGAC
GACTTATTAG CACGCTGGGG CGGCGAAGAA TTTGTGGTGG TGTTACCCAA CACGACATTA
GCTGATGCGA TTGAGTTAAC CGAAAGGTTA AGGCTATATA TTGCCATGCA AAATATTAAA
GGAATGGAGC TAACAATCAG CTTAGGTGTA GCTCAGTACA GGCTAGAAGA TTCAGCCCAC
AGCTTACTTG ACCGCGCAGA CAAAGCCTTA TATTCGGCAA AGTCTGGCGG GCGAAACTGT
GTAGCAGCAG CTTGA
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| Protein sequence | MSLRKLLMIK YWYKQFSQYP PDHPDYWRIR LIEHSLLITT SYFIILTLIN LFYFEGYQYA
LLDGSGLVIS LGIYYRFRST GHVKITAWAV TLMVASLIML FVISTKGYSH SLFWATLIPP
FSFFLIGRTW GTFISCICFS VCAFLVYLQT QNPQPVTFSK GSLFNVIEVC VAQILLFRFY
EKTRFSAYKK LALRNLEIQK MAETDKLTGL YNREKLDFAL DTLLTTPAAN TSMTTETTNA
IKQTDEAPII YQPYADDHPL TNHQTTQDLL SKQAVTQYPI SVAIIDIDHF KQINDNHGHL
IGDKVLCQLA QLLQNQMRND DLLARWGGEE FVVVLPNTTL ADAIELTERL RLYIAMQNIK
GMELTISLGV AQYRLEDSAH SLLDRADKAL YSAKSGGRNC VAAA
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