| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0749 |
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| Symbol | |
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| ID | 4278285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 879404 |
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| End bp | 880303 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133519 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_749444 |
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| Protein GI | 114561931 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA GGCAGTTACA TTATTTTTAT GAATTAGCGC AGTTTAAGCA TTTTGCTAAA
GCAGCCAAAG CTTGCCATAT TACCCAGCCG ACTTTGTCTG CCAGTATAAC CGCGTTGGAA
AAAAGTTTTG GTACCGAGCT AGTGGTGCGC GGCAGTCAGT TTGTTGCGTT AACCGATGCT
GGACAGATTG TATTGCGCTA TGCAGAAAAA ATGCTGTTAG ATCAAGCTGC GCTAAAACAA
GAGTTGAGTG TGTTTAGTGG GCCATTAATC GGCTCTTTGA GGATTGGCAT TGTGCCGCAG
TCGAGTGTCG ATATTATGCC GATAATTAAA GCATTCAATG AGCTGCACCC TAATATTGCC
GTGACGCTTT TAGTGACCAC CAATGAAAAG CTAATTGAGC AACTGACTTT GCATCAAATT
GATATCGGTC TAGGGTTTGA TGAAAACCTT ACTGAGGCGA ATCGTCGCAC GTTTCATTTT
TATCCGCAGA TTGATAATGA TATGGCGGTA TTATCAACCC AAGCCCTCGT TAATCAACTC
GATAGTACTA CGCTAAGAGA TAACCGATTA ACCCTTAATA ATTTGCAACG TTTACCATTG
GTGTTGTTAA GCCAAAATAT GCAGTTTAGG CAATACATTG ATAATGCGAT GGCAAAAACG
GATTTGCACT TTAATGTGGT GTTAGAAACC GACTCGCTAT TTCATCTAGT CAGCGCGGTA
AAACACAATA TTGGCTACGC GATTGTCAGC AGCGGTATTG CAAAATCGGC TCAGCAGTTA
TTCAATCTGC ATTACCGACA ATTGCAAAGT ATTGAATCGG GTAATACCGT GTTTATTACC
CGTAAATACA GTGTCTCACC AGCGATGCGC GAATTTGTGA GTCTGATTGA AATGGGGTAA
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| Protein sequence | MNLRQLHYFY ELAQFKHFAK AAKACHITQP TLSASITALE KSFGTELVVR GSQFVALTDA
GQIVLRYAEK MLLDQAALKQ ELSVFSGPLI GSLRIGIVPQ SSVDIMPIIK AFNELHPNIA
VTLLVTTNEK LIEQLTLHQI DIGLGFDENL TEANRRTFHF YPQIDNDMAV LSTQALVNQL
DSTTLRDNRL TLNNLQRLPL VLLSQNMQFR QYIDNAMAKT DLHFNVVLET DSLFHLVSAV
KHNIGYAIVS SGIAKSAQQL FNLHYRQLQS IESGNTVFIT RKYSVSPAMR EFVSLIEMG
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