| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0747 |
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| Symbol | |
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| ID | 4278283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 876116 |
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| End bp | 878461 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133517 |
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| Product | oxidoreductase alpha (molybdopterin) subunit |
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| Protein accession | YP_749442 |
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| Protein GI | 114561929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGTC ATCACCAAAA ACCAACCAAA GCCGGCGGAT TCCCTTCACT GCAAGCCACA
TTTACTCATG TACTTCGCAG CCAACACACT AAGCAAAACC TTAAAAACTT ACTCCGTGTT
AATCAAACTG ATGGCTTCGA TTGTCCGGGT TGTGCATGGG GCGATAACAA ACAAGGTGCA
TTTCAGTTTT GCGAAAATGG TGCTAAAGCC GTGGCATGGG AATCAACAGG CAAAGGCGTT
GGTCGCGATT TTTTTGCTCA GCATTCGGTA CGCCAACTAA CAAAACAGAC TGACTACTGG
TTAGAGTATC AGGGGCGTTT AACCGAACCA ATGCGCTTTA ATGCGATAAC AGATCACTAT
GAACCAGTAA GCTGGTCTGA GGCGTTTTCG ATTATCGCCA CCAAGCTCAA CAGTTTAAGT
AGCCCTGACC AAGTTGAATT TTACACTTCT GGACGCGCCA GTAACGAAGC ATCCTACCTC
TACCAACTGT TTGGCCGGCT TTATGGCACC AATAACTTTC CCGATTGCTC TAACATGTGC
CACGAAGCTA GTGGTGTCGC ATTAATTAGC GCCATTGGAA TAGGTAAAGG CACGGTAGTA
TTAGAAGATT TTGATGCCGC CGAAGCCATT TTTGTGTTTG GCCAAAACCC TGGCACCAAC
CACCCAAGAA TGATGAATAC TCTGCGCAAG GCCGCCAAAC AAGGGGGTAA AATTGTCACT
TTCAATAATC TTAAAGAAGT TGCCTTAGAA AAGTTCGCCA GTCCACAAAG TCCTATAGAA
TTGCTCACAC CAGCAGCCAC TACCATCAGC CATTTGTATT TAACCCCTAA ATTAGGCGGC
GATATGGCCG CTGCGCGAGG CATGGCTAAA TTTATTATTG AACAACGTCC AGATAAAATA
GACCATGAGT TTATACAACA GCACAGTGCA TTTTTTGAAG ATTATCAACA CAGTGTTACA
CACACTAGCT GGGATAAAAT AGAACAACAA TCTGGACTGA CAAAAGCAGA GATTATTCAA
GCTGCGACCG TGTTCAGTGA CAGTAAAACC GTGATCAGTT GCTGGGCAAT GGGCTTAACT
CAACATAAGC ATTCGGTCGA CATTATTCGT GAAGTCGTTA ACCTGCATCT GCTATGTGGT
CAAATAGGCA AAAAAGGCGC CGGATTATGC CCTGTTCGCG GCCACAGTAA TGTGCAAGGC
AACCGCACTA TGGGCATTAA TGAAAAGCCG TCTGCCGCTT TTATTACCCG CTTAGAACAG
CATTTGTCTA CCAGCTTACC GCGGCAAGCG GGCCACAATG TGGTCGAAGC CCTTAAAGCC
CTACACAGTA AACAGAGTAA GGTGCTAATT TGTTTAGGTG GAAATCTTGC GGCTGCGGCG
CCCGATACTG ATTTTACATA CCAAGCGATG CGCAATGCTG AACTGAATGT TCAAATCAGC
ACTAAGCTTA ATCGCAGCCA CTTACAAGTA ACACACGACG CCTTAATTTT ACCTTGTTTA
GGCCGTACCG AATTAGACAA GCAGCAAAGC GGCATTCAAA AAATCACCGT TGAAGATACC
TTTAGCATGG TTCATGCTTC AACAGGTATG ACCGAACCCG CCTCAGAACA ATGTTTATCT
GAAATTGATA TTGTCGCTCA AATGGCTCAT GCAACATTTA ACCATTCCGG CTCGACTCAG
CTCAACTCAA CAAACCATGC CGCAAATAAA CTAGATTGGC TGGCATTACG TGATGACTAT
GCACTAATTC GTCAGCTTAT CGAAAATACC ATCGACGGCT TTAATGACTT TAATCAACGT
ATCGAGCAAC CTGCCGGGTT TTATCTGGGG AATAGTGCTG CTGAGCTTAT TTGGAATACC
ACTAACCAGT TAGCTCAATT TAATCCTAGT CAGTTGCCAA ATTCAGTTAT TGCAGATTGC
TCAAGCAACG CACAAACAAC TGCGTCATCC GCCGAACAAC AAGCTATTTT TTTACTGCAA
AGTTTGCGAT CTCACGACCA ATACAACACC ACTATTTATG GCATGGACGA CCGGTATCGC
GGTATTAAAG GCAAGCGGAA TGTATTGTTT ATGAACCAAC AAGATGCTGT TCAACTTAAT
CTTCTTGAAG ACCAGCTTGT TGATATACAG TCTATTGCCA ACGATAATAT CGTCCGCAAA
GTCTGTGGCT TTAGCGTGGT TTATTACGAT ATTCCACGCG GTAACATTGC CGCATATTAC
CCCGAGACGA ATCCACTGGT GTCAATCAAC AGCGTCGGAA TTGGCTCTTA CACCCCAACC
TCAAAATCAA TCCCAGTGGT TATTACTGCA TCAACCAAAC AGGTGATTAG CGTGGCTCAG
GTATAA
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| Protein sequence | MSSHHQKPTK AGGFPSLQAT FTHVLRSQHT KQNLKNLLRV NQTDGFDCPG CAWGDNKQGA
FQFCENGAKA VAWESTGKGV GRDFFAQHSV RQLTKQTDYW LEYQGRLTEP MRFNAITDHY
EPVSWSEAFS IIATKLNSLS SPDQVEFYTS GRASNEASYL YQLFGRLYGT NNFPDCSNMC
HEASGVALIS AIGIGKGTVV LEDFDAAEAI FVFGQNPGTN HPRMMNTLRK AAKQGGKIVT
FNNLKEVALE KFASPQSPIE LLTPAATTIS HLYLTPKLGG DMAAARGMAK FIIEQRPDKI
DHEFIQQHSA FFEDYQHSVT HTSWDKIEQQ SGLTKAEIIQ AATVFSDSKT VISCWAMGLT
QHKHSVDIIR EVVNLHLLCG QIGKKGAGLC PVRGHSNVQG NRTMGINEKP SAAFITRLEQ
HLSTSLPRQA GHNVVEALKA LHSKQSKVLI CLGGNLAAAA PDTDFTYQAM RNAELNVQIS
TKLNRSHLQV THDALILPCL GRTELDKQQS GIQKITVEDT FSMVHASTGM TEPASEQCLS
EIDIVAQMAH ATFNHSGSTQ LNSTNHAANK LDWLALRDDY ALIRQLIENT IDGFNDFNQR
IEQPAGFYLG NSAAELIWNT TNQLAQFNPS QLPNSVIADC SSNAQTTASS AEQQAIFLLQ
SLRSHDQYNT TIYGMDDRYR GIKGKRNVLF MNQQDAVQLN LLEDQLVDIQ SIANDNIVRK
VCGFSVVYYD IPRGNIAAYY PETNPLVSIN SVGIGSYTPT SKSIPVVITA STKQVISVAQ
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