Gene Sfri_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0740 
Symbol 
ID4277647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp868349 
End bp869752 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content41% 
IMG OID638133511 
Producthypothetical protein 
Protein accessionYP_749436 
Protein GI114561923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTT CACTTTTTTT GCTCAGCTGT GCAATGTTAA GCCCTGCTAT AAACGCCAAT 
GAATTACCGC CAATTTTAGA TTTTTACCCA CTTTGTAGTC CACACACTAT CGATACAGCC
AATGATAAAA TCGTCTACGA TATTGACCCA GACTTGCTGG AATCGTCTAG TGATGGCGTT
TTGTCCCATC GTGATGCTTA TATACAACAA GCCTTTGTGG AAATACAGCG AAAAGCTGCA
GCAGCAGGAG CGGATGCGAT TATTCTTGAT AGATTAAGTG TTGGTGGAAT TGAGCGAAGT
ATTGACTTGC AAGATGACAG TAGCCGAGTT AAATCGAACA CCAAGCAAAT CCATGTGATT
ACCACTGCGC AATACGTTAC CTTTTGTGAC GATACACAAC TGAGCAAAGA TCCAACACCT
TATAACAGCG AAGGTAAATC GGTTTCGTAT ACCCAAACCA CAGTTCAATT GACGATGCCA
AACGAGGGGA ATGTATTAAA GCAAGCGCAA AAACACCAAG CACCTGATGC GCTTATTACA
ACCGACAGCG CCTATGGCAT ACACATTGGT GACTCGGTTG ATGTTTTACA ACAAGCATTA
GGTCCTCACA GTATTCAGTT GCAACTCGAC AATGGTGCAA CCGTTTATGG TTATGGGCGG
AGTCTATGGT TTGTTGTTAA AGACAATCGT ATCGAGATGA TTACCCAGGA TTTAGGATTG
TTAAATGGCC ATGGTCAAAA CCAAATTGCC TTAAGTGAAA ACTATGATGG CGATAATTGG
GTGATTGCTA ACCAAGTGCG TCAAGGTGAT GGGCTTACTA GCGTGAAAGC GCATTTAGCG
CTAAAAAAGC AAGGTGATGT TTACAGTGTG GCAGGTAAAA ATAGCCGATT GATATTAACC
TTTGAAGACT ATAATGAAAG TCTAGATAAC GCTGCTGTTT CTCGACTTAA CAGCTTTGCC
ATTATGCCAT TAACAGTCAC TGATGAGCAT CACGTTAAGT TCGGCAACTT TGATAATATC
AACATCGCAA CATTGTTGAC ATTAGCATTT AAGCAAGCTT ATACCTTGCA ACCACAACAG
CTCATCAACC AAATCCAATT GACAGACAAC GGTCCAAAAG TGCTGGTGAA TAGCAATGTG
TTATTGGGTT TTGATCGCCA AGGAGTCGTT AATTCAATTA AAATTACCGA GTCGATGCTT
GGCACGCAAA CGATGAGTGA ATTTAATGCT GTGCTTGCTA GTTATCAGTT GCCTACTATC
AAATCGCAAT TGTTGGAGCG ATACCCAAAC GCAGAAGATA ATTTTGATAA CATTATGCTG
ACAAAAGGGA AGGTGATGTT GTCGATTAAT TTTGATTCAT ACGATGACGA TGCGCAGCTG
ATTGATTTTA CGTTACGTTT TTGA
 
Protein sequence
MKPSLFLLSC AMLSPAINAN ELPPILDFYP LCSPHTIDTA NDKIVYDIDP DLLESSSDGV 
LSHRDAYIQQ AFVEIQRKAA AAGADAIILD RLSVGGIERS IDLQDDSSRV KSNTKQIHVI
TTAQYVTFCD DTQLSKDPTP YNSEGKSVSY TQTTVQLTMP NEGNVLKQAQ KHQAPDALIT
TDSAYGIHIG DSVDVLQQAL GPHSIQLQLD NGATVYGYGR SLWFVVKDNR IEMITQDLGL
LNGHGQNQIA LSENYDGDNW VIANQVRQGD GLTSVKAHLA LKKQGDVYSV AGKNSRLILT
FEDYNESLDN AAVSRLNSFA IMPLTVTDEH HVKFGNFDNI NIATLLTLAF KQAYTLQPQQ
LINQIQLTDN GPKVLVNSNV LLGFDRQGVV NSIKITESML GTQTMSEFNA VLASYQLPTI
KSQLLERYPN AEDNFDNIML TKGKVMLSIN FDSYDDDAQL IDFTLRF