| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0729 |
|---|
| Symbol | |
|---|
| ID | 4277636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 855503 |
|---|
| End bp | 856375 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638133500 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_749425 |
|---|
| Protein GI | 114561912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.446351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATCA TGTTTACCTT CCTCGCTGCG TTTATGCAGG CGTGGCGCAA TGCGTTTCAA
AGTAAACTCA GTAAAGAAGT CAGTGTTGCA GGTGTTACCT TAGCTCGATT CATTTGGGCT
GGCCCCATTG CTGCGTGTTA TCTGTATGGT TTACATCAAT ATCAACCTAG TGCATTACCT
GAGTTTACAG GGACATTTTG GGGTTTTGTT ATTGGTGCAT CATCGATGCA AATTCTAGCA
ACAGGCTTGA TGGTTAAACT GTTTAGAATG CAAAACTTTG CGATTGGTGC CGGGCTGGCT
AAAAGTGAAG CATTAGTAGC AGCAATACTT GGGGTGCTAT TTTTCGGCAC ACAATTATCC
TTATTAGGCT GGATAGGCGT TGTTATTGGC GGCTTAGCAA TAATGTTGTT AAGCAGCAAA
CAAGGTTTTA AACAGCTCTC AGTTAAAACA GTCTTGTTAG GGCTTGCGTG TGGCAGTGCT
TTTGCGTTGA CTTCCCTATG GGTACGCGAA GCAAGTTTAA CCCTACAAGG GCCGTTTACG
CATCGTGCTG CATGGGTATT ACTGTGGGTT ATTGGCTTAC AAACAATCGT GCTAATAGGC
TATTTGCTGG CAAAAGATAA ATCGACTTTA GCGGCGTTGT GGCAACGACC AACATTAACC
TTATCAATTA GTATTACTAG TTGTATCGGT TCAATTGGTT GGTTTAGCGC AATGTCGTTG
CAGGCTGTGC CTTATGTCAA AACACTAGGC CAGATCGAGG TGTTTTTTAC CTTGATGATC
GCTGTTTTTT GGCTTAAAGA TAAAGTTAAA ATTAACGATG TAGCGGGTTT GATTTTAATC
GCAATAGCAG CTGTTTTGGT CATGTGGAGC TAA
|
|---|
| Protein sequence | MWIMFTFLAA FMQAWRNAFQ SKLSKEVSVA GVTLARFIWA GPIAACYLYG LHQYQPSALP
EFTGTFWGFV IGASSMQILA TGLMVKLFRM QNFAIGAGLA KSEALVAAIL GVLFFGTQLS
LLGWIGVVIG GLAIMLLSSK QGFKQLSVKT VLLGLACGSA FALTSLWVRE ASLTLQGPFT
HRAAWVLLWV IGLQTIVLIG YLLAKDKSTL AALWQRPTLT LSISITSCIG SIGWFSAMSL
QAVPYVKTLG QIEVFFTLMI AVFWLKDKVK INDVAGLILI AIAAVLVMWS
|
|---|
| |