Gene Sfri_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0726 
Symbol 
ID4277633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp852235 
End bp853023 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content41% 
IMG OID638133497 
Producthypothetical protein 
Protein accessionYP_749422 
Protein GI114561909 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.935088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT ATCATCTTGA TGATGCAGTT TCGATACCTG AAACTGCATT TGAACTCTCT 
GAACATCTCG GCTTTTCAAC CTCAAAACCT GCTATGTGGG CATGGTATGA AATGGCTGGT
TCGGTATTGA GTCACTATGT TGTTGACCAA AAAGCACGGC TTGAAGGTCT GTTTAAGTGG
TTTTACAATG ATTTAGGCTT TTGTGCTCGC GATGACTATT TTAGTGTCGA AGCAGCAGAT
TTAAGCTATT GCGTGTTAAA GCGTCAAGGT AACAGCACTA CGTTATCAAT ATTATTAATT
TTATTGGCTA AGCAGCTCGA CTTAACACTC GAGGCGGTTT TATTACCCGG TAATACGGTA
TTAAAAAGCC AAGTGAATGA TGTTATTAGA TACCATGACC CGCTTACAGG TAAAGAGCTT
AGCCGTCATC AGTTGCACGC ATTTGTGCGC GGTGAATTGG GTAATGCGGC TAAATTAAAG
CCGAGTCATC TAAAAACTGC CACGCTAAAA CGTTTAATTA GCCGCATGTT GCACGAGCTA
AAAGCGGGTT GCATTGTCAG CCATAAGTTT GAACCGGCAA TGGAATGCTG TAATTTATTA
TTACAATGGC ACCCAGATGA TGTTCATCTT AATCGCGAAC GAGCGTTTAT TGCGCAGCAA
TTAGGTTGCA TTAAAGTGGC CATGTCTGAT TTACAGCACT TCATTGATTT GAGTCCGCAT
GATCCGGTAA TTGAACTGGT TAAGATTCAA TTAAAGGAAC TCAGTCAACA TATGCAGGTT
TATCATTAA
 
Protein sequence
MAKYHLDDAV SIPETAFELS EHLGFSTSKP AMWAWYEMAG SVLSHYVVDQ KARLEGLFKW 
FYNDLGFCAR DDYFSVEAAD LSYCVLKRQG NSTTLSILLI LLAKQLDLTL EAVLLPGNTV
LKSQVNDVIR YHDPLTGKEL SRHQLHAFVR GELGNAAKLK PSHLKTATLK RLISRMLHEL
KAGCIVSHKF EPAMECCNLL LQWHPDDVHL NRERAFIAQQ LGCIKVAMSD LQHFIDLSPH
DPVIELVKIQ LKELSQHMQV YH