| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0723 |
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| Symbol | prfA |
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| ID | 4277630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 849755 |
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| End bp | 850840 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133494 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_749419 |
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| Protein GI | 114561906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.905014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAT CCGTTATCCG CAAGCTTGAA GGCTTGCTCG AGCGTAATGA AGAAGTATTA
GCGTTACTCA GTGATGCTAC CGTGATTTCG GATCAAGACC GTTTTCGTGG ATTATCAAAA
GAATATTCTC AACTTGAAGA TGTTGTCAGT AGCTTTAAGG CATTTCAACA AGCTCAAAAA
GATTTCGACT ACGCCAAAGA GATGCTTGAA GAAGACGATC TTGAAATGCG CGAAATGGCG
CAAGATGAGT ATAAGCAGTC AAAGCAAGTG CTAGAAAAGC TTGAAGATGA ATTACAAGTT
TTACTATTGC CAACAGATCC TAACGATGAC ACCAACGCGT TTCTTGAAAT TCGCGCCGGT
GCAGGTGGTG ATGAAGCAGC TATTTTTGCT GGTGACTTAT ACCGTATGTA CTCACGTTAC
TGTGAAGCCA ACCGTTGGCA AATGGAAGTC ATGAATGTGA ACGAAGGTGA ACATGGTGGC
TTTAAAGAAA TCATTGTTAA AATAAGTGGT GACGGTGCTT ACGGTAAATT AAAGTTTGAG
TCTGGCGGAC ATCGTGTTCA ACGTGTGCCT GAAACTGAAT CTCAAGGCCG TGTGCATACT
TCGGCTTGTA CTGTTGTGGT ATTGCATGAA GTACCAGAGG CTGAAGCAAT TTCGATTAAT
GCAGCAGACT TAAAAGTTGA TACTTTCCGT GCGTCTGGTG CGGGTGGTCA GCACGTTAAC
AAAACTGATT CAGCGATTCG TATTACCCAT ATTCCATCAG GTATTATTGT CGAGTGTCAG
GATCAACGTT CGCAGCATAA AAACCGTGCC CAAGCGATGA GTGTATTGGC CGCGCGTATT
CAAGCTGTTG AAGATGAAAA AAGACGTAGT GCTGAAGAAA CAACCCGCCG TAGTTTAGTG
GCCAGTGGTG ATCGTTCTGA ACGTATTAGA ACCTACAATT ACCCTCAAGG TCGAGTAAGT
GATCATCGCA TCAACTTAAC GCTATACCGC TTGAATGAAG TCATGGAAGG CGATTTAAAT
GTCTTGCTTG ATCCTATCAT GCTAGAACAT CAAGCAGACA TGCTTGCAGC GTTAGCTGAC
GATTAA
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| Protein sequence | MKESVIRKLE GLLERNEEVL ALLSDATVIS DQDRFRGLSK EYSQLEDVVS SFKAFQQAQK
DFDYAKEMLE EDDLEMREMA QDEYKQSKQV LEKLEDELQV LLLPTDPNDD TNAFLEIRAG
AGGDEAAIFA GDLYRMYSRY CEANRWQMEV MNVNEGEHGG FKEIIVKISG DGAYGKLKFE
SGGHRVQRVP ETESQGRVHT SACTVVVLHE VPEAEAISIN AADLKVDTFR ASGAGGQHVN
KTDSAIRITH IPSGIIVECQ DQRSQHKNRA QAMSVLAARI QAVEDEKRRS AEETTRRSLV
ASGDRSERIR TYNYPQGRVS DHRINLTLYR LNEVMEGDLN VLLDPIMLEH QADMLAALAD
D
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