| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0721 |
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| Symbol | |
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| ID | 4278363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 847641 |
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| End bp | 848252 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133492 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_749417 |
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| Protein GI | 114561904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0885014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCGTTTAT CTGCATCTTT ATTTCATATC GCCCTCGTTA CCGTGTTGCT TGTCTTAGCC
GGTTGTAGTG TCACACCATC TGAAGATTTT AGCCCTATCA ATGTGACCAA TGCGGCTCAA
GCCAAAGCAT GGGAACTTCA AGGGAAAATT GCCGTCAAGA CATCTGAAGA CAAATTCAGT
ACCAATTTGT ATTGGCTGCA CCAAACGAAA GCTAATGATT TACGCTTAAC AACGGTATTA
GGCACAACAG TATTAACCCT TAAGACAAAT CAAGGTATGG CAACACTTGA CGTTGACGGC
AAAACCTATC GCGACAGTAA TGCTCAAGAT TTACTGACCG GTATTAGCGG ATGGTCAATC
CCACTTGATA GCCTTCCTTT ATGGATCACA GGTCAAATTG GCAGCAATGA TAAAATTGTC
AGCTATAATC CTGATGGCAC AATTAAACAA TTAATCAGTC ACGACCCTGA AGCCAATTGG
GTGGTCAGTT TTCTCGGTTG GCAACAACAA AGCGGCGCGC AGGTGCCTAG GTTGTTGAAG
ATTGAGCGTG AAGATGTGCA AATAAAAATT CAAACTAATC AATGGATAGC GGTAGCAGCC
AAAACAAAAT AG
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| Protein sequence | MRLSASLFHI ALVTVLLVLA GCSVTPSEDF SPINVTNAAQ AKAWELQGKI AVKTSEDKFS
TNLYWLHQTK ANDLRLTTVL GTTVLTLKTN QGMATLDVDG KTYRDSNAQD LLTGISGWSI
PLDSLPLWIT GQIGSNDKIV SYNPDGTIKQ LISHDPEANW VVSFLGWQQQ SGAQVPRLLK
IEREDVQIKI QTNQWIAVAA KTK
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