Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0719 |
Symbol | |
ID | 4278361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 845685 |
End bp | 846632 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133490 |
Product | ribose-phosphate pyrophosphokinase |
Protein accession | YP_749415 |
Protein GI | 114561902 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0196966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGACA TCAAGCTCTT TGCTGGTAAC GCTACCCCAA ATCTAGCCGC CAAGATAGCC GACCGTTTAT TTTGCAAACT TGGCGACGCA GTTGTAGGCC GTTTCAGCGA CGGTGAAATC AGTGTTCAAA TAAACGAGAA TGTACGTGGT GCGGATGTGT TCATCATCCA ATCTACTTGC GCACCAACTA ACGATAACCT CATGGAGCTT ATTGTAATGG TTGACGCGCT ACGTCGTGCA TCAGCGGGTC GTATTACTGC CGTTATTCCG TACTTTGGTT ATGCTCGTCA AGACCGCCGT GTACGCAGTG CACGTGTACC AATTACCGCA AAAGTTGTTG CAGATTTCTT GTCAAGCGTG GGTGTTGACC GCGTATTGAC TTGTGACTTA CATGCTGAGC AAATTCAAGG TTTCTTTGAT GTCCCTGTTG ATAACGTGTT CGGTAGCCCT GTGTTACTTG AAGACATGTT GGCAAAGAAA TTAGAAAATC CTGTTGTTGT GTCTCCTGAT ATTGGCGGTG TAGTTCGTGC TCGTGCCGTT GCCAAGCTAT TAGATGACTC TGACCTTGCG ATTATCGATA AGCGTCGTCC ACAAGCTAAC GTTGCTCAAG TAATGCATAT TATTGGTGAT GTTCAAGGCC GTGATTGCAT CATCGTTGAT GACATGATCG ATACTGGTGG CACTTTATGT AAAGCTGCTG AAGCATTGAA AGAACATGGC GCTAACCGCG TGTTCGCTTA TGCTACTCAT CCGGTATTCT CAGGTAATGC TGCTGAAAAT ATTGCTAACT CTGTTATCGA TGAAGTTATC GTGACAGACA CTGTGCCATT AAGCCCTGAA ATGTTAAAAG TGGCGAAAGT GACCCAGCTA ACAATGTCTG CAGTACTAGC TGAAGCGATA CGTCGCGTTA GTAACGAAGA GTCAATCTCT GCGATGTTCC GCCACTAA
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Protein sequence | MPDIKLFAGN ATPNLAAKIA DRLFCKLGDA VVGRFSDGEI SVQINENVRG ADVFIIQSTC APTNDNLMEL IVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV GVDRVLTCDL HAEQIQGFFD VPVDNVFGSP VLLEDMLAKK LENPVVVSPD IGGVVRARAV AKLLDDSDLA IIDKRRPQAN VAQVMHIIGD VQGRDCIIVD DMIDTGGTLC KAAEALKEHG ANRVFAYATH PVFSGNAAEN IANSVIDEVI VTDTVPLSPE MLKVAKVTQL TMSAVLAEAI RRVSNEESIS AMFRH
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