| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0716 |
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| Symbol | |
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| ID | 4278358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 841314 |
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| End bp | 841901 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133480 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_749412 |
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| Protein GI | 114561899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0115669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACA TTAAATTGAT TGTCGGGTTG GCAAATCCGG GTGCTGAATA CGCACAAACT
CGCCATAATG CTGGTGCATG GTACGTGCAA GAACTAGCGC GCATCTGTAA TGTCCCCTTG
GTTGCAGAGA GTAAATATTT TGGTGTCACA GCTCGTGCAA CTTTGCATGG CAGGGATGTT
CGTTTATTGA TCCCGACAAC GTATATGAAC TTAAGCGGTA AGTCGGTTGC AGCATTAGCC
AATTTTTTCC GTATTTTGCC TGAAGAAATC TTAGTCGCCC ATGATGAGCT GGATATGGAT
CCTGGTGTGG CTAAATTCAA GTTAGGCGGT GGCCATGGTG GTCATAATGG CTTAAAAGAC
ATTATTGCCA GTTTAGGTAA CGACAAAAAC TTTCATCGTT TGCGCATTGG CATTGGCCAT
CCAGGCGATA AAAACAAAGT CAGCGGCTAC GTACTGGGCA GGGCGCCAGC GGTAGAGCAA
GAGCGAATAA ATGCCGCGAT TGATGAAGCG GTGCGTTCAA CCGAGATTTT ATTTAACCAA
GACATGGCGA AAGCTATGCA TAGATTACAT TCGTTCAAAG CAGAATAA
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| Protein sequence | MSNIKLIVGL ANPGAEYAQT RHNAGAWYVQ ELARICNVPL VAESKYFGVT ARATLHGRDV
RLLIPTTYMN LSGKSVAALA NFFRILPEEI LVAHDELDMD PGVAKFKLGG GHGGHNGLKD
IIASLGNDKN FHRLRIGIGH PGDKNKVSGY VLGRAPAVEQ ERINAAIDEA VRSTEILFNQ
DMAKAMHRLH SFKAE
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