| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0715 |
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| Symbol | |
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| ID | 4278357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 839857 |
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| End bp | 841095 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133479 |
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| Product | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein |
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| Protein accession | YP_749411 |
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| Protein GI | 114561898 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00886299 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCA ATACAATGCA AGATGCTTCA TTCACATCAA CGAACACCTC TGGTAACGCT
AATCATTATG ATGTTGTCGT TGTTGGCGGC GGAATGGTCG GTGCGGCTGC TGCGATTGGA
TTAGGCCAGT TAGGGCTCAG TGTCGCAGTG ATTGAATCTC GCCAACCACA ACCTTATGAT
CCTTTACAGC CTTTAGATGT GCGAGTATCA GCAATTAGTG TGGCATCTGA GCAATTGTTA
ACGCGTCTTG GTGTTATGGA TGAGCTGCTA ACCATGCGCC ATGCACCTTA TACAGGTTTA
GAAACGTGGG AGCTCGATGG CTGCCTTACT GCATTTAGCG CCGAACAAGT TGATCAGTCG
CACTTAGGTT ACTTTTTTGA AAACCGTGTA ATTCAATTAA GCCTATGGCA ACAAATCTAT
AAAATGGACA ACATCACCTT ATTGTGTCCA GCAAAAGTGA TGCAGTTTTC TCGTTTAAGG
GACAGTCATC AAGTCGGTAT TTTGCTCGAT AATGGCGATA CGCTTACTAC AACATTACTT
ATTGGTGCTG ATGGGGCTAA CTCGCAAGTG CGCCAATGGG CGGGTATTGG TTTGACTGGT
TGGGATTACG CCCAATCGGC GATGTTAATC AATATTAATA CTCAAACGCC GCAGCAATCA
ATTACCTGGC AGCAATTTAC TCCAGCTGGA CCGAGAAGCT TATTGCCGCT GCCTGGAAAT
CATGCCTCAT TAGTGTGGTA TGACGATGCT AATCGTATTA AACAGTTATC TCAACTGAGC
GATCTACAAC TTGCCGAACA AATTAGACTG CATTTCCCGT CAAGATTAGA CCCTAATTTT
ACTGTTGAAA ATCGTGGTAG CTTTCCATTA ACTCGGCGCC ATGCACAACA ATATTATCAA
GATAATCTGG TTATTATTGG CGATGCGGCT CACACGATTA ATCCATTAGC TGGCCAAGGC
GTTAATATTG GTTTTAAAGA TGTCGATGTG CTGGTGGCTC AAATTGCTAA TGCTATTGGT
AATGGTAAAA CATGGTGGCA TGCGAGTGTA TTAAAGCATT ATCAGCAAGC GCGATATTAT
GATAATCAAT TGATGATGAC TGCAATGGAT GCTTTTTACG CTGGTTTTAG TAACAATTTA
TTGCCATTAA AATTACTGCG TAATGGCGCG TTAAAACTGG CCAATATCGA CTCACCGCTA
AAACGTAAAG TATTGAAGTA CGCGCTTGGG CTGAATTAA
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| Protein sequence | MDANTMQDAS FTSTNTSGNA NHYDVVVVGG GMVGAAAAIG LGQLGLSVAV IESRQPQPYD
PLQPLDVRVS AISVASEQLL TRLGVMDELL TMRHAPYTGL ETWELDGCLT AFSAEQVDQS
HLGYFFENRV IQLSLWQQIY KMDNITLLCP AKVMQFSRLR DSHQVGILLD NGDTLTTTLL
IGADGANSQV RQWAGIGLTG WDYAQSAMLI NINTQTPQQS ITWQQFTPAG PRSLLPLPGN
HASLVWYDDA NRIKQLSQLS DLQLAEQIRL HFPSRLDPNF TVENRGSFPL TRRHAQQYYQ
DNLVIIGDAA HTINPLAGQG VNIGFKDVDV LVAQIANAIG NGKTWWHASV LKHYQQARYY
DNQLMMTAMD AFYAGFSNNL LPLKLLRNGA LKLANIDSPL KRKVLKYALG LN
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