Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0709 |
Symbol | lnt |
ID | 4278351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 833537 |
End bp | 835099 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133473 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_749405 |
Protein GI | 114561892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.309882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAAAAA CTCAACCTTT ACACTCTTCT TTGAGTATTG TTCGTCTGGT GACGGCATTT ATTGCTGGCG CCAGTACGGC ACTTTCGTTT GCGCCTTATG AAATTTGGGC CATATTTCCT TTAGCATTGA GTTTTGCCCT ATGGCAGAGT CATACATTAA CCGCCAAGCA AAGTTTATAT TACTGGCTTA GTTTCGGTTT TGGCTGCTTT GCCATTGGCA TTAGTTGGGT GCATGTCAGT ATTGACACCT TTGGTGGGAT GCCCATTTTT GTGTCGATAA CCTTAATGGC TTTACTGGCA CTGTATCTGG CAATTTATCC CGCAATAACA GGATACTTGC TCAACAAGTT ATCACGTACA GCTAAGCACA CCTTAAATCC TTATTTAACC TATCTAGGAT TATTCCCCGC CTTATGGGTA CTAACCGAAT GGTTAAGAGG ATGGGTACTG ACAGGCTTCC CTTGGATTTG GGCTGGTTAC AGCCAAACAT TAGGGCCTCT TAGTGAATTT GCCAGCTTTA TTGGTGCGTT AGGACTGAGC TTTGTGGTGG CTCTGGTTGC AGGCTCACTG ATGCTGTTAA CACAAAAGCG CGTGTTCCCA GTGTTAATCA TATTACCCAT TTTGGCATTA AGCGCTTGGG CTGCACCACA ACTCAACCCA ATATCAGCCA GTGGTAAAAC AGTTAAAGTG GCATTAGTGC AAGGGAATAT CCCTCAAAGC ATGAAGTGGG AGCCAGATGC GTTGTGGCCT ACCATGCTTA AATACATGGA TCTGACCCGT GAGCAATTTG ATGATGCCTC TAGTGTCGAT ATCGTTATTT GGCCAGAAGC TGCCATTCCT GCACCAGAAG CCATGGTGGA AGACTTTTTA TTGAATGCCA ATCAAGTCGC CAATATGAAT AACACGGCGA TTATTACTGG CATTATTAGC CACCAGCAAA AAGATTTTTA TAACTCATTA ATCGTATTGG GTAATCATCA TCAGAAGCAG CAGCAAAGTG CTGACTATAT TGTCGGTGGC ACAAATGAGT TTAAAAAACA TCACTTACTG CCAATTGGTG AATTCGTACC ATTAGGGGAT TTATTACGCC CTATTGCACC GTTTTTTAAT TTACCGATGT CATCATTTCA ACGTGGTGAC TACACTCAAC CTAATTTAAT TGCACTGGGT TACCATTTAG CACCGGCTAT TTGTTACGAA ATTGCCTTCC CAGAGCAAGT AAGAGCAAGC GTTACAAACG AAACAGATAT GCTGCTCACC GTATCAAACG ATGCCTGGTT TGGCACATCT AACGGGCCAT TACAGCACAT GGAAATAGCC CAAATGCGTG CCATTGAAAT GGGTAAACCA TTACTGCGTG GTACCAATAA TGGAATTACT GCAGTCGTTG ATCCGCATGG ACGAATTACC GATGCTATCC CGCAGTTTGA AACTGGGGTG TTAGTAACCA ATGTTGCGCT TTATCAAGGT GAAACTTGGT TTAGAAAAAT AGGTCAACTC CCCTTGCTGA TACTGTGTGG TTTATTAATG CTATTTGGTG TCAGAAACGT CTTACGGAAA TAA
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Protein sequence | MLKTQPLHSS LSIVRLVTAF IAGASTALSF APYEIWAIFP LALSFALWQS HTLTAKQSLY YWLSFGFGCF AIGISWVHVS IDTFGGMPIF VSITLMALLA LYLAIYPAIT GYLLNKLSRT AKHTLNPYLT YLGLFPALWV LTEWLRGWVL TGFPWIWAGY SQTLGPLSEF ASFIGALGLS FVVALVAGSL MLLTQKRVFP VLIILPILAL SAWAAPQLNP ISASGKTVKV ALVQGNIPQS MKWEPDALWP TMLKYMDLTR EQFDDASSVD IVIWPEAAIP APEAMVEDFL LNANQVANMN NTAIITGIIS HQQKDFYNSL IVLGNHHQKQ QQSADYIVGG TNEFKKHHLL PIGEFVPLGD LLRPIAPFFN LPMSSFQRGD YTQPNLIALG YHLAPAICYE IAFPEQVRAS VTNETDMLLT VSNDAWFGTS NGPLQHMEIA QMRAIEMGKP LLRGTNNGIT AVVDPHGRIT DAIPQFETGV LVTNVALYQG ETWFRKIGQL PLLILCGLLM LFGVRNVLRK
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