| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0698 |
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| Symbol | |
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| ID | 4278741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 823006 |
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| End bp | 824127 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133462 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_749394 |
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| Protein GI | 114561881 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0484762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGGTA AAACCGTGAA TAATCATGCA TATCAAAAAT CGTTTTGGCA AAAAATACAC
TTAGATGTGC CATTACTCAT CGGCATCGTT ATTTTAATGA GCTTTGGTCT TTTTGTGATT
TATTCTGCCA GTGGCGAAGA TCCTGCGATG ATGGAGCGCC AACTTGTACG TATGGCGTTG
TCGTTGGGCG TGATGTTTTG CTTTGCACAA ATCAATCCAG AAATCCTCAG GCGTTGGGCT
TTACCTATTT ATCTTGCAGG GGTAGCGTTA CTCATCGGCG TTGAACTATT TGGCACCATT
AATAAAGGTG CTCAGCGCTG GCTTAATTTA GGGTTTATGG AATTCCAGCC ATCGGAACTT
ATCAAACTTG CCTTCCCCAT AACCATGGCG TGGTATATCA GTAAGTTCCC GCTGCCCCCC
AAAAAGCGCT ATCTGGCCGG TGGCGTTATT ATCCTACTAA TCCCAACATT ACTCATCGCT
AAACAACCGG ATTTAGGCAC CTCCATTTTG GTCGCTGCTT CTGGGGTATT CGTGTTGTTT
TTATCTGGCA TGAGTTGGTT AATTGTCGGC GGCTTTGTTA CCGCCATTCT GATCTTTTTA
CCTGTTTTAT GGTTTTTCTT GATGCACGAT TATCAGCGTA CTCGAGTATT AACCTTGTTT
AATCCTGAAC AAGATCCTCT CGGCGCGGGT TATCATATTA TCCAATCGAA AATTGCCATT
GGTTCAGGTG GACTTTGGGG AAAAGGTTGG CTTGACGGGA CTCAATCACA ATTAGAGTTT
TTACCTGAGC GACACACCGA CTTTATCTTT GCTGTGATCG GTGAGGAATT CGGATTAATT
GGCAGTTTAG TATTACTGGC AATGTATTTA TTTGTCATTG GCAGGGGTCT GGTTATCGCT
TCACGAGCAC AGACAAGTTT TGCACGCTTA TTGGCCGGAA GCATCACCCT AACGTTTTTT
GTCTATGTTT TTGTTAACAT AGGTATGGTA TCAGGCATCT TACCAGTGGT TGGTGTACCT
TTGCCGCTAA TCAGTTATGG TGGAACCTCG ATGCTGACCT TAATGACAGG TTTTGGTATT
TTAATGAGCA TTCACACCCA CAGACGATTT GTCGATAGAT AG
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| Protein sequence | MGGKTVNNHA YQKSFWQKIH LDVPLLIGIV ILMSFGLFVI YSASGEDPAM MERQLVRMAL
SLGVMFCFAQ INPEILRRWA LPIYLAGVAL LIGVELFGTI NKGAQRWLNL GFMEFQPSEL
IKLAFPITMA WYISKFPLPP KKRYLAGGVI ILLIPTLLIA KQPDLGTSIL VAASGVFVLF
LSGMSWLIVG GFVTAILIFL PVLWFFLMHD YQRTRVLTLF NPEQDPLGAG YHIIQSKIAI
GSGGLWGKGW LDGTQSQLEF LPERHTDFIF AVIGEEFGLI GSLVLLAMYL FVIGRGLVIA
SRAQTSFARL LAGSITLTFF VYVFVNIGMV SGILPVVGVP LPLISYGGTS MLTLMTGFGI
LMSIHTHRRF VDR
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