Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0696 |
Symbol | |
ID | 4278739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 821176 |
End bp | 821988 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133460 |
Product | rare lipoprotein A |
Protein accession | YP_749392 |
Protein GI | 114561879 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTA ATTACCGTTT CATCTTATTA ATCATGTTGA GCAGTGCACT ACTGATCAGT TGCTCGTCAA ATGATGCTAA AAAAACCTCT TCAGGGAAAA AAAGCCGCTA TCAAATGGCT AACGATCGTT ATCCTGATGA TGCACCAGAT GTGAGCTTGG TTAAAAACGC CCAACCTAAA TACGAACCTT ATAGCAGACA AGGTAATCGT AACTACACCG TATTAGGCAA AAGCTATCAA GTACTCGACA GCGGAAAGGG ATTTAAAGAG CAAGGTCATG CATCATGGTA TGGTTCAAAG TTTCATGGTC ATTTAACCTC TAATGGCGAA ACTTATGATA TGTACACTAT GTCTGCAGCG CATAAAAACC TGCCCTTACC CAGTTATGTC AAAGTGACCA ATTTAGACAA CAATAAACAA ATTATTGTTA GAGTAAATGA CCGCGGACCG TTTCATCATG GTCGAGTGAT TGATCTATCT TATGCTGCTG CTTACCACTT AGGCATGCTG GCCAGAGGAA CCGCAAAAGT CGCCATTGAA ACCGTTTACA TTCCCTCACC AGAAGAGCGA GTAATAAGCG ATTTAAAAGA TGATGACAAT CACTTTATTC AAGTTGCAGC GTCTCAAGAT AAACTGCGTA TAAATATGTT GGCTAAGCAG TTAGAAACCA AATATGCCGT GAATTCTCGC GTGACATCGA TAAATGGCAT GCACAGATTG CAGTTGGGCC CGATCAGACA AATTCATCTA ACTAATAAGT TGCTCGATCG TGTGCAAATT GATGGTTATC CGCAAAGCTT TATCGTACCG TAA
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Protein sequence | MAINYRFILL IMLSSALLIS CSSNDAKKTS SGKKSRYQMA NDRYPDDAPD VSLVKNAQPK YEPYSRQGNR NYTVLGKSYQ VLDSGKGFKE QGHASWYGSK FHGHLTSNGE TYDMYTMSAA HKNLPLPSYV KVTNLDNNKQ IIVRVNDRGP FHHGRVIDLS YAAAYHLGML ARGTAKVAIE TVYIPSPEER VISDLKDDDN HFIQVAASQD KLRINMLAKQ LETKYAVNSR VTSINGMHRL QLGPIRQIHL TNKLLDRVQI DGYPQSFIVP
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