Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0695 |
Symbol | |
ID | 4278738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 819811 |
End bp | 821022 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133459 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_749391 |
Protein GI | 114561878 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACTT CCAAAACCGC TCAATTAACA ACGATGCTCT TTGCATCAGT TGTCTGTTTT TCTTCACTCG CAGCAACGCC ACAACCAGAT ATACGTCCTA CACCCAATCG CGCACCTATG GTGACACCTG ATGCGCCGAG TGTTGCCGCT AAAGCTTACG TGCTAATGGA TTATAATTCT GGCAGAGTCA TTGCTGAAGA AAATGCCTAC GAAAGTTTAA ACCCAGCAAG TCTGACAAAA ATGATGACCA GTTATGTTAT TGGCCATGAA ATCCGTGTCG GTAATATTTC ATTAGATGAT GATGTAGCCA TTACCAAGAA CGCGTGGGCA AAGAATTTCC CTGACTCATC TAAAATGTTC ATTGAAGTGG GTAAAACCGT CAAAGTACAC GACTTAAACC GCGGTATTAT TATCCAATCG GGTAATGATG CTTGTGTTGC TATGGCTGAA CACATTGCTG GTACAGAAGG TGCATTCGTT GATTTAATGA ATTCATGGGC CAAGCAATTA GGCATGAAGG ATAGCTACTT TGAAAACTCT CATGGTTTAG ACTCAGAAAA TCATAAAACG ACAGCTTATG ATATGGCCAT TTTAGGTGCA GCGCTGATCC GTGATGTACC TGAAGAATAT AAAGTGTATT CAGAGAAGTC TTTTACCTAT AACGGCATTA AGCAATATAA CCGTAATGGC TTGTTATGGG ATAAAAGCTT AAACGTTGAT GGTATTAAAA CTGGCCATAC ATCAGGTGCA GGCTACAACC TAGTATCTTC AGGCACCAGC GAAGGCATGC GTCTTATTAG CGTTGTGATG GGCACATCAA GTGAATCTGC TCGTAAAGCT GAGAGTAAGA AACTACTCAA CTATGGTTTC CGTTTTTTCG AAACTATTAC ACCATACAAA GCTGGCGATA CCTTCGTAAC TCAACAAATT TGGTATGGCG ATAGAGAAAC AGTTGATCTC GGTGTTATGA CCGACACCCC TATTACTATT AGCCGTGGTA AAGCAAAAGA TTTACAGGCT AACTTTGAGT TAACAAAGCC ACTAACTGCC CCACTTGCTA AAGGCGAAAC AGTTGGTCGT GTCTTTTTCC AGCTTGATGG AAAAGACATT GCTCAGTTCC CGCTAGTGAC ATTGAATGAA GTTCAAGAAG GCGGCTTATT CAGCAAGTTA ATGGATTATT TTAAGCAAAT GTTTGCCAGT TGGTTTGAGT AA
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Protein sequence | MMTSKTAQLT TMLFASVVCF SSLAATPQPD IRPTPNRAPM VTPDAPSVAA KAYVLMDYNS GRVIAEENAY ESLNPASLTK MMTSYVIGHE IRVGNISLDD DVAITKNAWA KNFPDSSKMF IEVGKTVKVH DLNRGIIIQS GNDACVAMAE HIAGTEGAFV DLMNSWAKQL GMKDSYFENS HGLDSENHKT TAYDMAILGA ALIRDVPEEY KVYSEKSFTY NGIKQYNRNG LLWDKSLNVD GIKTGHTSGA GYNLVSSGTS EGMRLISVVM GTSSESARKA ESKKLLNYGF RFFETITPYK AGDTFVTQQI WYGDRETVDL GVMTDTPITI SRGKAKDLQA NFELTKPLTA PLAKGETVGR VFFQLDGKDI AQFPLVTLNE VQEGGLFSKL MDYFKQMFAS WFE
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