Gene Sfri_0693 details

Gene Information

• Locus tag: Sfri_0693
• Symbol: lipB
• ID: 4278736
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 818635
• End bp: 819285
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638133457
• Product: lipoate-protein ligase B
• Protein accession: YP_749389
• Protein GI: 114561876
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAGCAC AAACACTGCA CATCCGCCAT CTTGGTATGC AAGACTATGA ATCGACATGG 
CATGCAATGC AGGAATATAC TGACACTCGT GATAGCGACA GCCAAGATGA ACTTTGGATT 
GTTGAGCATC CACCAGTATT TACCCAAGGC CAAGCAGGTA AAAGCGAGCA CATACTCAAC 
CCTGGTGATA TTCCAGTTAT TCAAGTCGAT CGCGGTGGCC AAGTTACTTA CCACGGTCCA 
GGACAATTAG TGGTTTATCC ACTTATTGAC ATCAAACGTA ATAAACTAGG TGTTAGACAG 
TTAGTGAACA ATATTGAGCA AAGTATTATT GATATGCTCG CTTATTACGC TATTAATGCT 
TACGCAAAAG CCGACGCTCC TGGTGTTTAT GTCACAGAAC AAAAAATTGC CTCTTTAGGG 
TTACGCATCC GTAAAGGCTG CTCTTTTCAC GGCTTAGCAT TAAATGTCGA TATGGACTTA 
GCCCCGTTTC AGCGTATCAA TCCTTGCGGA TATGCCGGTT TAGAAATGGT GCAATGTAAA 
GCATTAGGTG GTCCACAAAC TGTGCTTGAA GCTGGCGATA AATTAATCCA AACCTTTAGC 
CAAATTATGG GCTATCAACA ACTTGTACAT CATCAAGGAT TAGCAGAATA A 

 

Protein sequence

MQAQTLHIRH LGMQDYESTW HAMQEYTDTR DSDSQDELWI VEHPPVFTQG QAGKSEHILN 
PGDIPVIQVD RGGQVTYHGP GQLVVYPLID IKRNKLGVRQ LVNNIEQSII DMLAYYAINA 
YAKADAPGVY VTEQKIASLG LRIRKGCSFH GLALNVDMDL APFQRINPCG YAGLEMVQCK 
ALGGPQTVLE AGDKLIQTFS QIMGYQQLVH HQGLAE