| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0682 |
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| Symbol | aspA |
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| ID | 4277223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 807535 |
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| End bp | 808977 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133447 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_749379 |
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| Protein GI | 114561866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA CTAATAGCAC ACGTATCGAA GAAGATTTAT TGGGTACTAA AGAAGTTTCT
AATAAATTTT ATTATGGCAT TCACACATTA CGTGCAATGG AAAACTTTAA ATTAAGTAAT
CAAAAAATTT CCGACGCACC TGAATTAGTA CGAGGCATGA TGCTAACAAA AAAAGCGGCA
GCCATGGCTA ATAGCGAATT AGGGGCTGTA AGTCCCGAGA TTGCGAATAA AATTATTGAA
GCCTGCGATC TGATCCTCAC GACAGGTCAA TTTGTCGACC AATTCCCAGT AGATGTTTAT
CAGGGTGGTG CTGGTACCTC GGTCAACATG AACACCAATG AAGTATTAGC CAATGTTGCA
TTGGAACTCA TGGGGCTAGA AAAAGGCCGC TATGATGTCA TCAACCCTAA TGACCATGTT
AATAAGTGTC AATCCACTAA TGATGCTTAT CCAACAGGTT TCAGAATTGC ATTGGTCAAC
AGCACAGATA CTTTATTGGA GGCATTAACC GACCTCATCA GTGCCTTCGA CACTAAAGCT
ACAGAATTCA AGACCGTATT AAAAATGGGC CGCACTCAGT TACAAGACGC TGTGCCTATG
ACATTAGGCC AGGAGTTTCA CGCTTTTGCT GTAACACTGC GCGAAGAAAT TAAATCAATT
AAACGTTGCC AAGAATTATT ACTTGAGGTG AATTTAGGCG CAACGGCTAT TGGTACTGGT
CTAAACACTC CAATAGGGTA CTCCTCATTG GCCATTAAAC ATTTGGCTGA AATTACTGGA
CGTGAATATG TGCCAGCAGA AGATTTAATT GAAGCGACAT CGGATTGTGG CGCCTACGTT
ATGCTGCACA GTGCAATTAA GCGTATGGCC ATTAAAATGT CCAAAATCTG TAACGATTTA
CGCTTGCTTT CATCGGGTCC ACGCACAGGA TTCAATGATA TCAATTTGCC TCAGTTACAA
GCCGGTTCGT CAATCATGCC TGCCAAGGTC AACCCTGTGA TCCCAGAGGT GGTTAACCAA
GTGGCTTTTA AAATTGTCGG TAACGATATT ACGATCACTA TGGCCGCAGA AGCCGGCCAG
TTACAACTTA ACGTAATGGA ACCTGTCATT GGCCAGGCGA TGTTTGAGTC GCTAAGTCTT
ATGGGGAATG CCTGTATCGC ACTGCGTGAG AAGTGTGTTG AAGGGATCAC AGCCAATCCT
GATGTCTGTA TGAATCATGT ATTAAATTCC ATTGGCATCG TGACCTATCT TAATCCGTTC
ATCGGTCACC ATGAAGGCGA CATTATCGGA AAAATTTGTG CCCAAACGGG TAAAAATGTC
CGTGAAGTGG TGCTAGAACG AGGCTTATTA ACAGTTGAAG AACTCGATGA AATCCTCTCT
GTCGAAAACC TAATGCATCC TAAGTATCAG GCTAAACGAA ATACTAGCAA AACCAAAGTG
TAA
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| Protein sequence | MKNTNSTRIE EDLLGTKEVS NKFYYGIHTL RAMENFKLSN QKISDAPELV RGMMLTKKAA
AMANSELGAV SPEIANKIIE ACDLILTTGQ FVDQFPVDVY QGGAGTSVNM NTNEVLANVA
LELMGLEKGR YDVINPNDHV NKCQSTNDAY PTGFRIALVN STDTLLEALT DLISAFDTKA
TEFKTVLKMG RTQLQDAVPM TLGQEFHAFA VTLREEIKSI KRCQELLLEV NLGATAIGTG
LNTPIGYSSL AIKHLAEITG REYVPAEDLI EATSDCGAYV MLHSAIKRMA IKMSKICNDL
RLLSSGPRTG FNDINLPQLQ AGSSIMPAKV NPVIPEVVNQ VAFKIVGNDI TITMAAEAGQ
LQLNVMEPVI GQAMFESLSL MGNACIALRE KCVEGITANP DVCMNHVLNS IGIVTYLNPF
IGHHEGDIIG KICAQTGKNV REVVLERGLL TVEELDEILS VENLMHPKYQ AKRNTSKTKV
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