Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0681 |
Symbol | |
ID | 4277222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 806121 |
End bp | 807368 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133446 |
Product | anaerobic c4-dicarboxylate antiporter, Dcu family protein |
Protein accession | YP_749378 |
Protein GI | 114561865 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAGCA TGGGGATCGG CTTTGCTGGC GGTGTCGGAG TGCTGATACT GACAGCTGGA CTTGGGCTAA CACCAGGGAC TATCCCGATT GATGTAATCC TAATCATTAT GTCGGTGATC ACCGCCATTG CAGCCATGCA AGTATCGGGA GGGATGGACT ACCTCGTCTC ACTGGCTGAG AAATTACTAC GTAAACATCC AAAACAAATT ACCTTTCTAG CACCCGTCGT CACTTATTTC ATGACACTCT TTGCTGGAAC GGGTCACACA GCATTCTCAA CTTTACCTGT TATTGCAGAA GTAGCCAAAG AACAAGGTAT ACGTCCATCT CGACCTCTAT CTATCGCAGT TGTAGCATCT CAAGTCGCCA TTACTGCCTC ACCTATTTCA GCGGCAGTAG TGTTCTTCTC TGGCATCTTA GAGCCACTTG GAGTGGACTA TTTAGTGCTA TTAGCAGTAT GTATCCCCTC CACTTTTCTC GCTTGTATGG TCGGGGCCGT AGTAGCCAAT TTAATGGGTA AACCGCTAGC AGAAGATCCG ATTTACCAAG ACCGTTTGGC TAAAGGATTA ATCAAAAAAC GTGGTGCTAC CCAAATAAAC ATTAAAGACG GTGCTAAACG TTCAGTGGTG ATTTTTTTAA TGGCTATTGC GGCTGTGATG ATTTATGCCA CTGCGATTTC CGACAAAGTG GGATTAATTG TTAATCCGGT ATTGCCTCGC GATTCAGCCA TCATGGTGAT TATGCTAACT GCTGCTGCGG CTATAACGAT TTTTTGTAAA TTAGACGCTA GCGAAATTTC TAATGCTGCC ACTTTTAAGT CAGGTATGTC TGCCTGTGTC TGTGTGCTAG GCGTTGCGTG GTTAGGGGAT ACTTTTGTTG CAAACCATAT TGATGAAATC AAAGACCTTG CAGGAACCTT ACTGCAGAGC CAGCCATGGT TATTGTCGGT AACACTATTC TTCGCTTCTA TGTTGCTCTA CTCACAAGGG GCCACAACTA AAGCGCTGAT GCCTGCGGCA TTAGCCATTG GTGTGAGCCC TTTAACTGCC GTTGCCTCTT TTGCTGCTGT GAGTGCGTTG TTTGTACTAC CTACTTATCC AACGCTACTG GCAGCTGTCG AAATGGATGA CACAGGCTCA ACTCGAATTG GTAAGGCGGT ATTTAACCAC CCATTCCTCA TCCCTGGTGT AGTGACAATT GCTACCAGTG TCGCGTTAGC GTTCTTATTT GGCGGCATGA TTATATAG
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Protein sequence | MGSMGIGFAG GVGVLILTAG LGLTPGTIPI DVILIIMSVI TAIAAMQVSG GMDYLVSLAE KLLRKHPKQI TFLAPVVTYF MTLFAGTGHT AFSTLPVIAE VAKEQGIRPS RPLSIAVVAS QVAITASPIS AAVVFFSGIL EPLGVDYLVL LAVCIPSTFL ACMVGAVVAN LMGKPLAEDP IYQDRLAKGL IKKRGATQIN IKDGAKRSVV IFLMAIAAVM IYATAISDKV GLIVNPVLPR DSAIMVIMLT AAAAITIFCK LDASEISNAA TFKSGMSACV CVLGVAWLGD TFVANHIDEI KDLAGTLLQS QPWLLSVTLF FASMLLYSQG ATTKALMPAA LAIGVSPLTA VASFAAVSAL FVLPTYPTLL AAVEMDDTGS TRIGKAVFNH PFLIPGVVTI ATSVALAFLF GGMII
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