Gene Sfri_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0680 
Symbol 
ID4277221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp805258 
End bp805983 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content44% 
IMG OID638133445 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_749377 
Protein GI114561864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA AAACGCGCGT TCCAACCGCC ATCAACGGTG GACCATTTGG ACAAGCCTGG 
TCAGCTAGAG CCGACTGTTT ACAAAGTTTG ACGGGTGTTT TACTGGGCGC TTTCTTATTA 
GTGCATATGC ATTTTGAGGC AAGCATTTTA TTAGGCAAAG AAACCTTCTA CCGCTTCGTG 
CAAGTACTTG AAGGTGGCAT GTTTAGCGCT ACTGGGCACG GTTGGCCACT AGTGACACAA 
ATCTTTTCAG TATTTATTTT AGTTATCGTC GTCGTTCACG CGGCGCTAGC ATTACGTCGC 
TTTCCGGTAC AACTTGGCCA GTGGCGTGCA CTTCGTGGGT TTATGTCCAA CATAAAGCAC 
AAAGACACTC GCGCTTGGTA TTGGCAAATG ATCACTGGAT TCATCTTATT TTTCTTAGTC 
TCAGCACATC TTGCAACCAT GATTTTAGAT CCTAAAATTG GTCCACACCT CTCAGCCGAC 
CGCGTCTATA ACGGACATGC CTGGCTCTTG TATGTGGTAT TCCTTCCGGT TGTATTAGTA 
CATGGCTTAA TTGGCTTATA CCGAGTGATA TTAAAATGGG GAGTGAGCAA TAATCGTTCT 
CTTATACGCA CAATTGCCCA GGTGTTAATG ATCTATTTAC TTTGTTTAGG TTCATTAAGC 
CTCATTACCT ACATCTCTAT TGGCAGTGAA CTGACACTAC CCGTTCAGCC GTTTATTCCG 
AAGTAA
 
Protein sequence
MSEKTRVPTA INGGPFGQAW SARADCLQSL TGVLLGAFLL VHMHFEASIL LGKETFYRFV 
QVLEGGMFSA TGHGWPLVTQ IFSVFILVIV VVHAALALRR FPVQLGQWRA LRGFMSNIKH 
KDTRAWYWQM ITGFILFFLV SAHLATMILD PKIGPHLSAD RVYNGHAWLL YVVFLPVVLV 
HGLIGLYRVI LKWGVSNNRS LIRTIAQVLM IYLLCLGSLS LITYISIGSE LTLPVQPFIP 
K