Gene Sfri_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0672 
Symbol 
ID4277214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp791293 
End bp791826 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID638133434 
ProductISSod10, transposase OrfB 
Protein accessionYP_749370 
Protein GI114561857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00023725 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTTAG ATCGCATTGA TGTTTGGTTT CAAGATGAAG CCAGATTTGG TCAGCAAAAT 
ACCACGACCC GCATTTGGGC AACGAAAGGA ACCCGACCAC GAGCGGTAAG GCAACAACAG 
TTCGAATCAG CATATTTATA TGGTGCGGTG TGTCCTGCAA CGGGCACGAC AGAGGCTATT 
ATTGCCCCGC ATGCCAACAG TGAATATATG TGGGAGCATT TAAAATTAAT TTCAGAGGCT 
ACCGAATCGG GTCGCCATGC TTTGGTCATC ATGGATGGTG CAGGTTGGCA TCAACAAGAT 
CTGACTGAGG ACTTTGATAA CCTTAGTATC CTTAAGCTTC CGCCCTATTC GCCAGAACTC 
AACCCTATAG AACAAGTGTG GCAATGGCTT CGTCAGAATG AACTCGCAAA TCGTTGCTTT 
AGTGGATATG ACGATATTGT TGAGCAGTGT TCCATTGCAT GGAATCGATT TATTGCAGAG 
CCGGAAAGGG TGATTCAACT ATGTTCTAGA CGTTGGACAA AATTGACCAA TTAA
 
Protein sequence
MALDRIDVWF QDEARFGQQN TTTRIWATKG TRPRAVRQQQ FESAYLYGAV CPATGTTEAI 
IAPHANSEYM WEHLKLISEA TESGRHALVI MDGAGWHQQD LTEDFDNLSI LKLPPYSPEL 
NPIEQVWQWL RQNELANRCF SGYDDIVEQC SIAWNRFIAE PERVIQLCSR RWTKLTN