| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0652 |
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| Symbol | |
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| ID | 4278173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 757337 |
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| End bp | 758077 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133409 |
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| Product | hypothetical protein |
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| Protein accession | YP_749350 |
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| Protein GI | 114561837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000354938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC TGCTACTTAC TGCAGCAATT ACACTAACCA TGCCATTTGC AGCACATGCT
GGAAGTGAGT TTGTTGAAGG TGATGCCACT CTTGCTGGTG AAGCAGAATT AGGTGCGACT
TTAACCACAG GTAATACCGA TACTTCTTCG TTTAAAGCGC GCCTAGCGTT GAAACAAGAA
TTAGGTGACT GGGAAAACGA GTATGTGTTT GAAGGATTAT ACAAAGAAGA CACAGAAGAA
GTGACTGCAA AGCGTTATTT CCTTGGTGTG CAAGGCGACT ATCAAATTAA TGATGTGAGC
TATTTGTTTG CTAACACTAA CTATGAAGTG GATCCATTCA CGGGTTACGA TTTCACTTCA
ACGACTTCAG CTGGTTATGG TCACCGTTTT ATTGACACCG ACAGAATGTC TTTAAAAGCA
GAGGCAGGTC CTGGTTATAT TTATCAGCAA CTTGATGAAG AATCAGCACT GGCAGAAGGT
TATGATAGCG ACGACAGCGT TGTTGCTCAC GCGGTGATTG ATTTCCAAAC CAAGATCAGT
GATTCATCTA AGTTCCAGCA GAAATTTGTT GCCGATTGGG GTAGTAAATT AGATGCACGT
TCTGAAACGT CATTAACTGC AAATATCGTT GGTGCTCTAG CGATGAAATT TGCCGTTATT
GTTCGTTATA ACAGTGAACC GCTTGATGAC AAAGAAAGTA CTGACACTGA AACAAACATG
ACATTACTTT ACGCATTTTA A
|
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| Protein sequence | MKKLLLTAAI TLTMPFAAHA GSEFVEGDAT LAGEAELGAT LTTGNTDTSS FKARLALKQE
LGDWENEYVF EGLYKEDTEE VTAKRYFLGV QGDYQINDVS YLFANTNYEV DPFTGYDFTS
TTSAGYGHRF IDTDRMSLKA EAGPGYIYQQ LDEESALAEG YDSDDSVVAH AVIDFQTKIS
DSSKFQQKFV ADWGSKLDAR SETSLTANIV GALAMKFAVI VRYNSEPLDD KESTDTETNM
TLLYAF
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