| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0636 |
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| Symbol | |
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| ID | 4278592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 739953 |
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| End bp | 740960 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133393 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_749334 |
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| Protein GI | 114561821 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.632135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGT TAAAAAGTGT CGCATTATTA GGGTTGGCTT GTGTTGCTTC TTCTGTGAGT
GCCGCAGAGG CATTAACGGT TTATTCTTAC CGCCAAGCTT TCCTGATTGA GCCTATTCTA
GAAAAGTTTA CCGAACAAAG TGGTGTCGAC GTAAATGTTG TTTTTGCTAA AGATGGTATC
GCAGAACGTA TGGTGCGCGA AGGCCGCCTA TCTCCCGCAG ACGTGGTATT AACATCTGAT
TTCTCTCGCT TAATGGAATT AGTGGAAAAG GATCTTATTT CTCCCGTCGA CAGTGCGGTG
ATTGATAGTA ATATTCCAGC TCAATATCGG TCACAACAGA ACAATTGGTA TGCGCTGACA
ATGCGCGTTC GTAACCTGTA TTCTTCTAAA GATCGTAGCG GTAAAATTGA CATCGATTAC
GAAGACTTAG CCTCAGCAGA ATACAAAGGT AAAATTTGTA CTCGCAGTGG CAAACACCCT
TATAACGTCG CATTAGTGGC GTCGATGATT GCTCATGACG GTGAGGCGAA AACTAAAACC
TGGTTAGAAG GGGTAAAAGC CAATCTAGCC CGTAAGCCTC AAGGTAATGA TCGTGATCAA
GTGTTAGCAG TTAAAGAGGG CATGTGTGAC ATTGCTATCG GTAACAGCTA CTACTATGGC
AACATGCTGA TGGATAAAAA TCAGAAAAGC TGGGCAGAAG CGGTTGAAAT TAACTTCCCT
AATCAACATA ACCGTGGTGC TCATGTAAAC GTATCAGGTA TGGCATTAGC CAAACATTCA
CCGCATAAAG ATAACGCGAT TAAGCTCATG GAATTTCTTA CTTCAAACGT TGCGCAGAAA
ATGTATGCTG AAGTTAATAT GGAATATCCG GTAAAAGCTG ATGTAGCACC GTCTGAATTA
GTGGCGTCAT GGGGTGATTT TAAAGCCGAT AGTTTGCCTA TCTATAAGTT GGCTGAACAC
CATCAAGCTG CTGTAAAATT GCTTGATGAA GTGAAATTTG ATCTTTAA
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| Protein sequence | MKLLKSVALL GLACVASSVS AAEALTVYSY RQAFLIEPIL EKFTEQSGVD VNVVFAKDGI
AERMVREGRL SPADVVLTSD FSRLMELVEK DLISPVDSAV IDSNIPAQYR SQQNNWYALT
MRVRNLYSSK DRSGKIDIDY EDLASAEYKG KICTRSGKHP YNVALVASMI AHDGEAKTKT
WLEGVKANLA RKPQGNDRDQ VLAVKEGMCD IAIGNSYYYG NMLMDKNQKS WAEAVEINFP
NQHNRGAHVN VSGMALAKHS PHKDNAIKLM EFLTSNVAQK MYAEVNMEYP VKADVAPSEL
VASWGDFKAD SLPIYKLAEH HQAAVKLLDE VKFDL
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