| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0621 |
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| Symbol | |
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| ID | 4278421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 723630 |
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| End bp | 725345 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638133378 |
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| Product | nitrate/nitrite sensor protein NarQ |
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| Protein accession | YP_749319 |
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| Protein GI | 114561806 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000745015 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTC GTGGCAGCCT TACTTCCACC ATTTTAAGTT TAATGCTCAT TCTAATTTTG
TTGTCATCAA GCTTAGCGGT ATTTTCTATC GTCAATTTAA CCTTCAGCTT AGGCGATGCC
AAAGGCATCA ACGCCTCTGG TTCACTGCGG ATGCAAAGTT ATAGATTGTT GCTGTATACC
AATGCCGGTA GTAACAATAC CGATAAAAAA ATTATTGAAT TCGAAAATAC GCTTAATTCA
GAAGCGCTTA AACGTTCTCT TCAATGGTAC AGCCCCAAAG AGTTGCGTGA CCAATATTTA
TTGGTTATCG ACAAATGGCA AGTGATGAGA GTGTATATTG GAGAAGGGAA TACGCGACTG
TACTCAGCCT CGTTAACTGA TTTTGTCGAC ACCATTGATA CCTTGGTATT AAAGATGGAA
TTGTTCGCGG CCTTTAAACT AAAACTATTG GTTATTGGAC AGATTATCGG TTTATCAATT
TTACTTGTTA TCGCCTTCTT TGCCGTAGTA TTCACACGTA AACGAGTTGT TAAACCATTA
CAATTATTGA TGGATAGTGC AGCAACAATC TCCAAAGGTA ACTTCAAAGT TGAAATGCCT
AAAACGGGTT ATATTGAACT GACCGCTCTG GGTAATGCAT TGCAAAAAAC GGCAGCAGAA
TTAGCCAATT TATATGAAGA TTTAGAAAAC CAAGTAAACG AAAAAACCTT GGCATTAACA
CGAGCAAACA ACGAGCTAAA ATTTTTATAC GACAACCTAG TTATGTTACA TGCTGATAAA
CTCGACTATA AAGCACTGCA ATCTGCAATC AATCAGCTGA AATATTATGA AGACTTAACC
TTTCTTCGAT TAGTTGTTGA GCATGAGGAT GGCTCTAAAG ACGTCATTAA GGCTGAAGGC
GGTTGGCCTG ACGATTTATC CACTGAATCG GTACAGTTTC CGCTATTGAT AGAAATGACT
CAAATGGGCT ATTTAGAAGT AATATCCAAT AAGCCATTGA ATAAACAATT GTTTGAAAAT
TTTGCCATGA TGTTAACCCG TTCTATTACC ATCCATAATG CCTCGGAACA ACGTCAACAG
CTGGCGTTAC TGGAAGAGCG TGCCGTCATC GCTAGAGAAT TACATGATTC AATTGGGCAG
TTATTATCCT TTCTAAAAAT TCAAGTCAGT TTATTACGTA AAAGCCTTGA TCACAGTTGC
CGTAGTCCTG AAGTGGAAGG TCAATTGACC GAGATCAATG AAGGTGTGAG TACTGCTTAT
GTACAATTAC GTGAACTGTT ATCTACATTT AGATTAACCA TAAAAGAGCC TAATTTAAGT
CAAGCTATCG AAGTCATGTT GGATCAATTA CGTCATCAAA CCAATATCGA TATCCAATTA
AACTACAAAC TTTCAGCACA TTTACTGGAA GCTAAACAAC ACATTCATAT TTTACAATTA
ATTCGTGAAG CGACAATAAA TGCAATTAAA CACGCTAACC CTGCCCATAT AGTGGTAAAT
TGTCAGTTAA CTGGCAATGG CATGATTACT ATTTCAATTT GTGATGATGG CATTGGTGTG
ACACATATAG CTGAACGAGA CCAACATTTC GGCATTGGCA TCATGCATGA GCGTGCCAAC
AAACTTAATG GTACCGTCTC GTTCAATAGT AATCACCTCG GCGGCACTAC AGTAACGCTG
AGTTTTCCAC CTCAACAGGA GCCTTTAAAT GGGTAA
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| Protein sequence | MFTRGSLTST ILSLMLILIL LSSSLAVFSI VNLTFSLGDA KGINASGSLR MQSYRLLLYT
NAGSNNTDKK IIEFENTLNS EALKRSLQWY SPKELRDQYL LVIDKWQVMR VYIGEGNTRL
YSASLTDFVD TIDTLVLKME LFAAFKLKLL VIGQIIGLSI LLVIAFFAVV FTRKRVVKPL
QLLMDSAATI SKGNFKVEMP KTGYIELTAL GNALQKTAAE LANLYEDLEN QVNEKTLALT
RANNELKFLY DNLVMLHADK LDYKALQSAI NQLKYYEDLT FLRLVVEHED GSKDVIKAEG
GWPDDLSTES VQFPLLIEMT QMGYLEVISN KPLNKQLFEN FAMMLTRSIT IHNASEQRQQ
LALLEERAVI ARELHDSIGQ LLSFLKIQVS LLRKSLDHSC RSPEVEGQLT EINEGVSTAY
VQLRELLSTF RLTIKEPNLS QAIEVMLDQL RHQTNIDIQL NYKLSAHLLE AKQHIHILQL
IREATINAIK HANPAHIVVN CQLTGNGMIT ISICDDGIGV THIAERDQHF GIGIMHERAN
KLNGTVSFNS NHLGGTTVTL SFPPQQEPLN G
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