| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0613 |
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| Symbol | |
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| ID | 4278535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 716455 |
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| End bp | 717396 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133370 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_749311 |
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| Protein GI | 114561798 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTT TGCATTTTGA CTCTTTGGTC TGGCATTGGC CCATTGCCAT ATATCTATTC
CTAGCAGGGG TTTCTGCCGG TGCGATGTTC TTTGCCGTAT TGCTGAAACA TGTATGCCTT
AAAGAACAAG CATACCGTTC AGGCTTTGTT CAAGCAGCGT GTATTGTTGC AGCAGTTTCC
GTTTTAGCAG GTTTGGGGAT TTTGGTATTA GATTTAACCA AACCATGGGA TTTTTGGAAA
ATACTTGTGT TCTACAATCC CACCTCAGTG ATGTCGATGG GTGTATTGAT CTTGTTGATT
TATCAAGTAT TCATGTACGC TTGGATTGCT GTTGTATTCC GTAAACCTAT TGAAGAATGG
TGCCAACCTC GCTTCCCGAT AGTGTGTAAA ATAACCACAA TGCTCGCGAA GTATGAAGCT
GGAATAACGG GATTGTTGAT CATCTTTTCT GTGTCGCTAG GTGCCTATAC CGGATTTTTA
TTATCGGCTC AGCCACGCTT TCCTATGCTA AATAACCCTG TGTTACCTTT GTTATTTTTA
GCATCGGGTT TATCTTCAGG TGCCGCGGCG TCGTTATTAG GCGGGGTGTT ACTCAAAGGT
AGCCCTAATG GTCAGGAAGT GCGTTTTATC CATAGAGTAG AAATCCCTTT GATTTTAGGA
GAAATTTTCC TTATTTTTAC CTTCTTTATG GGTTTAGTTC TCAGTGGTGG TCAAAGTAAA
GTCGCGGCAT TAAACGCGAT TGGAGAAGGA TTTTGGGGTT TAATATTTTG GTTCGGGATT
ATGGGATTAG GATTGTCCGC CCCATTAGCG ATGAATTTAT TTATGAACGC CACTTCAAAA
CGCAAGTTTT CCTATGTTGC CGGAACTGCG TGCCTGAGCT TATTGGGCGT TATCATGCTA
CGTAACTTTG TACTTTATAC TGGCCAAATG GTGGTAAGTT AG
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| Protein sequence | MNALHFDSLV WHWPIAIYLF LAGVSAGAMF FAVLLKHVCL KEQAYRSGFV QAACIVAAVS
VLAGLGILVL DLTKPWDFWK ILVFYNPTSV MSMGVLILLI YQVFMYAWIA VVFRKPIEEW
CQPRFPIVCK ITTMLAKYEA GITGLLIIFS VSLGAYTGFL LSAQPRFPML NNPVLPLLFL
ASGLSSGAAA SLLGGVLLKG SPNGQEVRFI HRVEIPLILG EIFLIFTFFM GLVLSGGQSK
VAALNAIGEG FWGLIFWFGI MGLGLSAPLA MNLFMNATSK RKFSYVAGTA CLSLLGVIML
RNFVLYTGQM VVS
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