Gene Sfri_0609 details

Gene Information

• Locus tag: Sfri_0609
• ID: 4278531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 710427
• End bp: 712487
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638133366
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_749307
• Protein GI: 114561794
• COG category: [R] General function prediction only
• COG ID: [COG3211] Predicted phosphatase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.500063
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGG CGACATTTGA TCCAACTCGT TTTAACAACA GTAAAAATAC CCCCTTCAAT 
GAAGTGATGG AGAATCATCT ATCACGTCGT AATTTTGTTA AGCGTGGTTT AGGCCTTAGT 
GCGATGACAG CGTTTGGTGG CTTCGGATTA AGTGCTTGTG GCTCTGACAA TGATACCGTT 
GCAGAAACGC CAACAACGCC GACCACGCCA ACAGCACCAA CGAAGAGTTC TGCAGTACTA 
GGTTTTGAGT CGATTGTCGG TTCTAAAACC GATGCCGTGG CGGTAGCTGC TGGCTATTCA 
GCTTATGTAT TAGCACCCTG GGGAACTCCC TTAAATTCGA AAGCTGCAGC GTGGAAAGCC 
GATGGCAGTA ATACTGCTAT CGATCAGGAA AACTCAGTCG GTATGCATCA TGATGGTATG 
CATTTCTTCC CGTTGAATGA TTCGGCAGAT GACGGTTTAT TGTGTATTAA CCACGAATAC 
ATTGACCAGG ATGCTTTACA TCCAACAGGC CCAACGTTTG ATGCTGATGG TAAGCGCACT 
GTAATTGATG AAATCCGCAA AGAAATCAAC GCCCATGGTA TTTCAGTTGT CCGTATTAAA 
TTAGTTTCTG GACGATGGCA AGTGGTCGAA AACGACAGCC ATAACCGTCG TTTTACCGGT 
GCAACCGTGA TGGATATTGC TGGCCCACTA GCGTACAGCT CACACCTTGA AACGCGTTAT 
TCGCCAGATG GCAGCCAAGC GCGCGGTACT TTAAATAACT GCGGTAATGG TTATACGCCT 
TGGGGCACTT ATCTAACATG TGAAGAAAAC TGGCCGGGTT ATTTTGTTAA TAAAGGCACC 
TTAACGCAAG AGCAAACGCG CATTGGTATT TCGACTTCTG ACACTCGTTA TGGCTGGAGC 
CACTTAGCCG GTAATGACGA TGAGCGTTTA GACGAATTTG CTCGTTTTGA TGTGACGCCA 
ACGGGCTCAA GTGCGACTAA CGATTACCGT AACGAAGCCA ATGGCCACGG TTATATTGTT 
GAAATTGATC CATACAATCC TAACTCGCGC GCCATTAAGC GTACTGCATT AGGTCGCTTC 
CGCCACGAGG GTTGTGCCTT TGGTAAACTT GAAGAAGGCA AACCAATCAC ATTCTATTCA 
GGCCACGATT CTCGTTTTGA ATATCTGTAT AAGTTTGTTT CTGACGCAGC GTGGGATCCA 
GCAGATGCTA ACAGCACTAA CCGCTTAACA GTAGGCGATA AGTACATGAA TGCCGGAACC 
TTATATGCAG CTAAGTTTAC CGAAGACGGC GTCGGTGAAT GGTTACCGCT GACGTTAGAT 
GGGGTGACTG CCGACGGAAG CACGCTTGCG AGCAGCTTTG ACTCACAAGC CGCGATTATA 
TTAAATACTG CTGGCGCTGC TGACTTAGTG GGTGCTACAC CAATGGATCG CCCAGAATGG 
ACAACCGTTG ATCCATTTAC CGGTACGGTA TACCTAACGT TAACCAACAA CAGTAAACGT 
ACCGACAGCA CCAACCCTGC TAACCCACGT TTAAATAATA ACTTTGGTCA TATTATCCGT 
TGGGATGAAG GTGATGCAGC AACTGAATTT AGTTGGGATA TCTTTATATT TGGTTCACCT 
GCAGATGGTG ATGCTGAAAC AAACTTATCT GGCTTAACTG ACTTAAACCA GTTTGCTAGC 
CCAGACGGCT TGGCGTTCGA TCAACGTGGT ATTTTGTGGG TGCAAACCGA TAACGGTGCC 
TCTGAAGTTA CCGAAGAAAC CAACGATCAA ATGTTAGCGA TTGTGCCATC AACGATGGTA 
GATGCAGATG GTAACCAACA AGTGGTAACT GCTGAAAACC AAACTCAGCT TAAGCGTTTC 
TTTGTTGGCC CTAACGGCTG TGAAGTGACA GGTTTTGCCA TGTCGCCAGA CTACACCGCA 
ATGTTTGCCA ATATTCAGCA TCCTGGCAAC TGGCCATACT CTGATAGAGC AGATGAAGAA 
ACGCCCGCAG GCACAACGGT TCGTCCACGT GCAGCCACAG TGATGTTTAT TAAAGATGAC 
GGCGGTGAAA TCGGCGTTTA A 

 

Protein sequence

MSKATFDPTR FNNSKNTPFN EVMENHLSRR NFVKRGLGLS AMTAFGGFGL SACGSDNDTV 
AETPTTPTTP TAPTKSSAVL GFESIVGSKT DAVAVAAGYS AYVLAPWGTP LNSKAAAWKA 
DGSNTAIDQE NSVGMHHDGM HFFPLNDSAD DGLLCINHEY IDQDALHPTG PTFDADGKRT 
VIDEIRKEIN AHGISVVRIK LVSGRWQVVE NDSHNRRFTG ATVMDIAGPL AYSSHLETRY 
SPDGSQARGT LNNCGNGYTP WGTYLTCEEN WPGYFVNKGT LTQEQTRIGI STSDTRYGWS 
HLAGNDDERL DEFARFDVTP TGSSATNDYR NEANGHGYIV EIDPYNPNSR AIKRTALGRF 
RHEGCAFGKL EEGKPITFYS GHDSRFEYLY KFVSDAAWDP ADANSTNRLT VGDKYMNAGT 
LYAAKFTEDG VGEWLPLTLD GVTADGSTLA SSFDSQAAII LNTAGAADLV GATPMDRPEW 
TTVDPFTGTV YLTLTNNSKR TDSTNPANPR LNNNFGHIIR WDEGDAATEF SWDIFIFGSP 
ADGDAETNLS GLTDLNQFAS PDGLAFDQRG ILWVQTDNGA SEVTEETNDQ MLAIVPSTMV 
DADGNQQVVT AENQTQLKRF FVGPNGCEVT GFAMSPDYTA MFANIQHPGN WPYSDRADEE 
TPAGTTVRPR AATVMFIKDD GGEIGV