| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0605 |
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| Symbol | |
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| ID | 4278527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 704130 |
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| End bp | 707177 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133362 |
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| Product | hypothetical protein |
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| Protein accession | YP_749303 |
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| Protein GI | 114561790 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTAGTC CACATACAGA CAGTCAGTTT GATAATTATC GACCTAATGC ATCTTCCGCC
AAACCGGCTC CGGTTCGTCG CAGTAAAGCG GGTTGGTTAT TGATCGTATT ATTGTTAGCA
ACAGCTTATC TGATCGAGTT TGAGGTGCGG ACATCGTATT ATCAATCTTA TTTTTTACAT
CAATATGCCA CTAAATTAAC CTATAAAGTA CGTGATTATC GCAGCGATGC GGTGATTTAT
CCTAAGTATG GTCCCTTTGA TGACCGCCAT GGTTATAGCC AATTACCGCA GAAAATAGCG
CGTCTTATTG AGCGTAATTA TCAAATCACT CAGCAGGTGG CATTTTCACC AATGTTGATG
GATTATACCA ATATTGGTTT TTTCCCGCCG TATCATGAAA AAGCCCAATC TGGTTTAGCA
ATTAAAGATT GCCGCGACAT GACGGTATTC GATTTCTCCT ATCCTAAACG TGTGTATCAA
GACCAAGATA AAATCCCAGA TCAAATCATC AATACCTTAT TATTTATCGA AAATCGTGAA
ATGTTGAGTC CAGAAGCTAA CTACAACCCC GTTGTTGACT GGCCACGATT TGTGCTGGCT
GCCGCCAGTC AGGTAGCGGG TATTTTTGGG GCTGATATGT CTAAAGCGGG TGGCAGTACT
TTGGCCACCC AAATTGAAAA ATTCAGGCAT TCTAACCACG GCTTAACCTT GAGTATTAAA
GATAAGTTAT TACAAATTGG TTCGGCCATT GTACGAGTGT ATCAGCAAGG TGAAAGCACC
GTTGGCGCTC GCCAACGCAT CGTACAAGAT TATCTCAACA CAGTGCCATT ATCATCGGCT
CCGGGTTTTG GTGAAGTCCA CGGTATTGGT GATGGTTTAT GGGCCTGGTT TAAAACAGAT
TTTAATCAAG CTAACCAATT GCTTTTGAGT CGTCATACTC AACAAAATGC TGCTGAGCGT
GGCAAGGTGT TTCGTCAAAT CGTAGCTTTA ATGATTGCTC AGCGTCGGCC ATCGTATTAC
TTACGCCAAG GTCATGATGA TTTAGAATCG TTAGTAGACA GCTATTTACG TTTACTGGGC
GGTGATGGGT TAATTGAAAC GCAATTGATG GTGTCGGCAC TTGAGCAAAC ATTACAATTT
AACGCCAGTA AGTTAGCGAC GACTAACCTC GCTAACAATA AAGGGGTTAA TGCGGTACGT
ATTCGCACTG CGGGTATGTT GGGACTAAGT TTGTTTGATC TTGATCGCTA TGATTTATCG
ATTAACAGTA CCTTCCATGG TGACTTGCAA CAACAAGTTA GCGATTACTT ACGTAGTTTA
GCTCAGCCCA GTTCGGCTGA ACGTATCGGA CTACTGGGTG AGCGTTTACT GTCGGTGCAG
CAGTTAGATA AAGTGTTGTA CAGCTTTACC TTGTATGAAA GTACCGACAG TGCCAATAGG
GTGCGGATTC AAACCGACAG TATTGATCAG CCGTTTGATA TTAATGAAGG CAGTAAGCTG
GAGTTAGGTT CAACGGCTAA GTTACGTGTA TTAGCGACAT ATTTAGACAT TATTGCCGAA
TTACAACAGC GTTTTTCTGC AATGACGGTG GCTGATTTAC GCCAAGTGGA TGTGGAACGT
AAAGACCATA TTACGCGCTG GGTGGTCGAT TATTTGATTA CCACCCGTGA CCGTAATTTA
ACCCGAATGT TGGATGCTGC ACTGCAGCGC GAATATTCGG CTTCACCAGA AGAACGTTTC
TTCACCGGTG GTGGTTTGCA TGTATTTAAC AATTTTAATA AAAAAGAAAA CAGTCGCGTA
CCAACATTAT ATCAAGCATT GCAAGAGTCG ATAAACTTGC CTTTTGTGCG CTTAATGCAA
GACATTGTTA ATTACAGTAG TAGTTATAAC AGTGAAGGCA GTGTGTCGCA GCTATTGCGT
AACGACAAAG ATCCGCGCCG TGAAGAATAC CTAAAAGCAT TTGCTAAGCG TGAGGGCAGT
TCGTTTGTAA AACGTTTTTA TCGCAAGTAT CGTCAGCTTG CACCAGAGCA GCGTCTTGAG
GTGTTATTTG ATGGTATTCA ACAACAAGAA CACAAGTTAA CGGCCGTTTA TCGTTATTTA
AAACCTTACG ATGGCGCCCG TGAGTTAACA GCTTTTTTAA CTCAGCGATT ACCAGCAAAA
ACCTTTACCG ATAAACAAAT TAATGTGCTG TACAACAAAT ATGGCGAAGA AAAATTTAAT
TTAGCTGATC AAGGCTATAT TGCACGGGTG CATCCGTTAG AGTTGTGGGT ATTACGCTAT
TTAAATGACT ATCCGGAAAC TGGCCTTACT CAAGTATTAG AAGACGCACA ACCGCAGTTA
CAAGAAGTGT ATCGCTGGCT GTTTAGAACG CGTCATCAAA ATGCTCGTGA TGTGCGTATT
CAGGTGATGT TAGAAGTGGA AGCATTTTTA AGTATTCATC AACGTTGGGT GAGAATGGGT
TATCCGTTTG AATACATGGT GCCTTCATTA GGCTCTGCTT TAGGCAGCTC GGGCGACAGA
CCTGCAGCAT TGGCTGAGTT AATGGGTATT ATTCAAAATG ATGGCTATCG TTTCCCTACC
GTGAGAATTG ATGAGCTGCA GTTTGCCAAA GACACACCTT ATGAGGTGAC ATTGGCCAAT
AATAAACAAA CTGTTATGCG AGTAATGCAC CAAGAAGTTG CACGAGCGTT GAAAAAAGCA
CTGGCAAATG TGGTCGAAAA TGGCACAGCA AGAAGGCTCA AAGGCAGTTT AGTGGATAGC
AATGGCCAAA TGATTGTTAT GGGAGGAAAA ACCGGTACCG GCGATAACCG TATTGCGACT
GAAATTCGTA ATGGCCGTAA AGTGTCTTCA ACTGCTATAA ACCGTACTGC CACATTTGTG
TTTTACTTAG GCGATCGTCA TTTTGGTACC CTAACTGCAT TTGTACCAGG GGAGAAAGCC
GACGACTTTA GCTTTACTTC AGCACTGCCA TTACAAGTAC TTAAAGGCAT GATGCCGATT
TTATCACCGA TGATAAATCA GCAAGAACAG TGTCAAACCG GTTTATAG
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| Protein sequence | MSSPHTDSQF DNYRPNASSA KPAPVRRSKA GWLLIVLLLA TAYLIEFEVR TSYYQSYFLH
QYATKLTYKV RDYRSDAVIY PKYGPFDDRH GYSQLPQKIA RLIERNYQIT QQVAFSPMLM
DYTNIGFFPP YHEKAQSGLA IKDCRDMTVF DFSYPKRVYQ DQDKIPDQII NTLLFIENRE
MLSPEANYNP VVDWPRFVLA AASQVAGIFG ADMSKAGGST LATQIEKFRH SNHGLTLSIK
DKLLQIGSAI VRVYQQGEST VGARQRIVQD YLNTVPLSSA PGFGEVHGIG DGLWAWFKTD
FNQANQLLLS RHTQQNAAER GKVFRQIVAL MIAQRRPSYY LRQGHDDLES LVDSYLRLLG
GDGLIETQLM VSALEQTLQF NASKLATTNL ANNKGVNAVR IRTAGMLGLS LFDLDRYDLS
INSTFHGDLQ QQVSDYLRSL AQPSSAERIG LLGERLLSVQ QLDKVLYSFT LYESTDSANR
VRIQTDSIDQ PFDINEGSKL ELGSTAKLRV LATYLDIIAE LQQRFSAMTV ADLRQVDVER
KDHITRWVVD YLITTRDRNL TRMLDAALQR EYSASPEERF FTGGGLHVFN NFNKKENSRV
PTLYQALQES INLPFVRLMQ DIVNYSSSYN SEGSVSQLLR NDKDPRREEY LKAFAKREGS
SFVKRFYRKY RQLAPEQRLE VLFDGIQQQE HKLTAVYRYL KPYDGARELT AFLTQRLPAK
TFTDKQINVL YNKYGEEKFN LADQGYIARV HPLELWVLRY LNDYPETGLT QVLEDAQPQL
QEVYRWLFRT RHQNARDVRI QVMLEVEAFL SIHQRWVRMG YPFEYMVPSL GSALGSSGDR
PAALAELMGI IQNDGYRFPT VRIDELQFAK DTPYEVTLAN NKQTVMRVMH QEVARALKKA
LANVVENGTA RRLKGSLVDS NGQMIVMGGK TGTGDNRIAT EIRNGRKVSS TAINRTATFV
FYLGDRHFGT LTAFVPGEKA DDFSFTSALP LQVLKGMMPI LSPMINQQEQ CQTGL
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