| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0602 |
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| Symbol | |
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| ID | 4278524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 701022 |
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| End bp | 701654 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638133359 |
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| Product | transcriptional regulator, LuxR family protein |
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| Protein accession | YP_749300 |
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| Protein GI | 114561787 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.126322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCA ATAACCTTTT AATCGTAGAT TTCCCTGTTC ATCTTCATGG GCAATTTCAA
AACCTCGCTA ATTTGATTGA ATTTAACTTA ATTCCAACCA ATGCGAGCTG CGCGTTATCA
GAATTATCAG CCGCATCAAA TTCCGAAAAT GGCAGCGCCA TTATGGTTCA TTATCTTGAA
AATCCATTAC AAGAAATTGG TTACTTATCT GCAGAGTTAT TTAAAAGCGA CCTGCACATT
GCATTTTGTC CTGCACTGAA TGTAGAACTA GAGGTTATTC TTATTTCATC TGGATTTCAT
GGTGCCATCA GTGTCGATGA CTCTATCGCT CATCAAATAC AAAGCATTAA ACAAGTGCAA
GATGGCGACA TTAGCTTTAA CCCTAAAGCC GTTTCTAAAT ACATCCTCCA AAGAAAGCGT
ATTCCATCAT CAGGTAATCG CGCCAAAATA CTTGCCGTCA CCACAAAAAA AGAACAACAA
GTCTTGTCAC TCATACTGCA TGGATTAACC AACGAAGAAA TGGCCAAAGA GCTCAACATT
TCTGTTAATA CCGTCAAAAT GCACGTACAA AATATTTATA AAAAAACCAA AATTAAAAAT
CGCGGCCAAT TATTTGCTTT TGCTGCCGGT TAA
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| Protein sequence | MFSNNLLIVD FPVHLHGQFQ NLANLIEFNL IPTNASCALS ELSAASNSEN GSAIMVHYLE
NPLQEIGYLS AELFKSDLHI AFCPALNVEL EVILISSGFH GAISVDDSIA HQIQSIKQVQ
DGDISFNPKA VSKYILQRKR IPSSGNRAKI LAVTTKKEQQ VLSLILHGLT NEEMAKELNI
SVNTVKMHVQ NIYKKTKIKN RGQLFAFAAG
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