Gene Sfri_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0578 
Symbol 
ID4278519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp670709 
End bp671200 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID638133336 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_749277 
Protein GI114561764 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGTA AAGTGCTTAC TGAGTCTCAA TTACCTTCAG CGCAAAATCC GCTAGCACTT 
GAAAACCAAG TGTGTTTTTC ATTGTATAGT GCGACTAATG CGATGATCCG TGCATATCGA 
CCATTATTGG ATGAGTTATC GCTAACTTAT CCGCAGTATC TAGTGATGAT GGTACTTTGG 
AAAGAGCCGG GGATCAGTGT TAAAACCTTA GGTGAGAAAT TACATCTTGA TTCTGGAACA 
TTAACACCCT TGCTAAAGCG TCTAGAAAGC AAAGGCTTAG TGAGCCGTGG CCGTAGTGAA 
TTAGATGAAC GCGTGCGAGT GTTACATGTT ACTGAGCAAG GCCAACAATT ACATCAGCAA 
GCGTTGAGTA TTCCTGAACA GATGCGTTGT AAAGTGGGTG GCACTATTGA AGACTTACAA 
CAATTAAAGC AACTGTGTGA TCAAGCATTT ACCATGTTAA ATTCCGGAGA GGCGAGCAGC 
TGTGAAATGT GA
 
Protein sequence
MSSKVLTESQ LPSAQNPLAL ENQVCFSLYS ATNAMIRAYR PLLDELSLTY PQYLVMMVLW 
KEPGISVKTL GEKLHLDSGT LTPLLKRLES KGLVSRGRSE LDERVRVLHV TEQGQQLHQQ 
ALSIPEQMRC KVGGTIEDLQ QLKQLCDQAF TMLNSGEASS CEM