Gene Sfri_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0575 
Symbol 
ID4278516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp669112 
End bp669666 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID638133333 
Producthypothetical protein 
Protein accessionYP_749274 
Protein GI114561761 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGCTT TATTCGCCTC AACTCTCACA GTTGCCATCG CTGAAATAGG CGACAAAACT 
CAATTATTAG CTTTACTGCT CGCGGTGAGA TTTAGCAATA AAACCGCTAT TATCTCAGGC 
ATTTTGCTTG CCACATTATT AAATCATTTT CTTGCCGCAT GGTTAGGTCA ATGGGCAATT 
GCGTGGATTG ATCCACAATG GACGACCTAT TTGGTGGCCG GGTCATTTTT TGCTATTGCA 
CTATGGGTCC TTATACCCGA TAAAATGGAT GATGATGATA ATCGCTTCTA TAAACTCGGT 
GCTTTTTCTG CAACGTTTAT TTTGTTTTTT ATTGCTGAAA TAGGGGATAA AACTCAAATT 
GCGACGGTGG TCTTAGCGGC AAAATACCAA GCACTGACAT GGGTTGTCAT CGGCACGACA 
TTGGGAATGT TAATTGCTAA TGTCCCCGTT GTGCTGGCTG GGCATTTTAG TGCTAACAAA 
TTGCCCATGA AACTGATTCA TCGCGGTTGT GCTGTGTTGT TTGCGCTACT TGGGGTCGCT 
ACATTGCTGT GGTAA
 
Protein sequence
MEALFASTLT VAIAEIGDKT QLLALLLAVR FSNKTAIISG ILLATLLNHF LAAWLGQWAI 
AWIDPQWTTY LVAGSFFAIA LWVLIPDKMD DDDNRFYKLG AFSATFILFF IAEIGDKTQI 
ATVVLAAKYQ ALTWVVIGTT LGMLIANVPV VLAGHFSANK LPMKLIHRGC AVLFALLGVA 
TLLW