Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0574 |
Symbol | |
ID | 4278515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 667445 |
End bp | 668647 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133332 |
Product | aromatic amino acid permease |
Protein accession | YP_749273 |
Protein GI | 114561760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATTTTA AAACTTTAGG TTCTATTTCG ATTGTCGCGG GAACGGCAAT TGGCGGAGGC ATGCTAGCGC TACCATTAGC AACAGCAGCT TTGGGGATGA TCCCCGCATT AATCTTATTA GTGGTTATTT GGGGTTTATC GGCTTACACC TCGTTACTGA TGTTAGAAAT TAATCTTCAC AGTGGTGTCG GCGATAACGT CCATGCCATT ACTGGTAAAA CACTGGGCAA AGTCGGCCAA CTCATTCAAG GAGGCTCATT CCTTAGCTTA TTATTCGCCT TAACCATGGT GTATCTAATG GGAGGGTCAT CGCTATTAGA AACCCGTTTA CAACCCATCG GCATTAACAT GAGCAACCAA GTCGCCGTCA TACTTTTTAC GGTTATTTTT GGTGGCTTGA TTGCCATTGG TGTTAAATGG ATTGATAAAG TATCACGTAT TTTATTTACT TCTATGGTGG TGCTGCTTGT CATTGTGGTG GCATTTCTAT TACCAGACGT TAATTTAATC AGTGCATTAA ACAATTACTC AACCGATGTG GCATCGGGCA CCGCTTTACA ACAATTATGG TTAGCAGCTA TCCCGGTAGT ATTCACTTCA TTTGGTTTCC ACGTGTGTAT TGCCACCATT GTGCGCTACT TAGAGGGTGA TGCTGCATCA CTTAGAAAAG TGTTATTAAT AGGCTCGACC ATTCCACTGG TTTGTTACAT CCTGTGGTTG CTCGTAACGC TAGGTTCTTT AGGTGGCGAA ACAGTTCACA GCTTTGGTGG TTCACTGCCT AAACTGGTTG CTGCTTTACA AGGTTTAGCC CAGTCACACA TTATCAGCCA AGCAATTGAT CTATTTGCCA ACCTTGCATT GGTGACCTCA TTTTTGGGTG TCACCATGAG CCTATTTGAT TATGTCGCCG AACTGACCCG AGCTAAAGAT GACGCTGTTG GTCGTGCTAA AACATGGTTA ATAACATTTA TACCACCACT GTTATGTGCG CTTTACTACC CAGACGGATT TTTCAAAGTG CTAGGTTTTG CTGCCATTCC ATTGGTGGTG ATGATTATCT ATTTACCCAT TGCGATGGCA TTAAAGCAAC GCTCACAGCA ATTAGGCGGT TATCAAGTTT CTGGCGGCAC ATTAGGGCTG ATCGCCGCAG GATTGCTCGG CACATTAATT GTTGTGGCGC AGTTGATGGT AGCATTAGCC TAA
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Protein sequence | MNFKTLGSIS IVAGTAIGGG MLALPLATAA LGMIPALILL VVIWGLSAYT SLLMLEINLH SGVGDNVHAI TGKTLGKVGQ LIQGGSFLSL LFALTMVYLM GGSSLLETRL QPIGINMSNQ VAVILFTVIF GGLIAIGVKW IDKVSRILFT SMVVLLVIVV AFLLPDVNLI SALNNYSTDV ASGTALQQLW LAAIPVVFTS FGFHVCIATI VRYLEGDAAS LRKVLLIGST IPLVCYILWL LVTLGSLGGE TVHSFGGSLP KLVAALQGLA QSHIISQAID LFANLALVTS FLGVTMSLFD YVAELTRAKD DAVGRAKTWL ITFIPPLLCA LYYPDGFFKV LGFAAIPLVV MIIYLPIAMA LKQRSQQLGG YQVSGGTLGL IAAGLLGTLI VVAQLMVALA
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