| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0558 |
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| Symbol | |
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| ID | 4278726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 647203 |
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| End bp | 648432 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133316 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_749257 |
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| Protein GI | 114561744 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAC ACTCGCTTGA CAAGGATAAG ATCAAAATCC TGCTGTTGGA GGGCGTCCAC
CAAACTGCGG TCGATGTACT AGAACGTGCA GGTTATACCA ACATTGAATA CCATAAAGCC
TCGTTAGGCG AAGAGGCTTT GCTTGCATCA ATTAAAGATG CTCACTTCGT TGGATTACGC
TCCCGCACCC AGCTTACTGC GGAAGTACTG CATCATGCAG AAAAGTTGGT TGCGATTGGT
TGTTTTTGTA TTGGTACCAA CCAAGTCGAT TTAGCCTCGG CTGAGAAACT GGGCATTCCA
GTTTTCAACG CTCCTTTCTC CAACACGCGC AGTGTTGCTG AATTGGTGAT TGGTGAAATC
ATCATGCTGA TGCGTGGCAT TCCACAGCGC AATGCCATGT CACATCGTGG CGGTTGGTTG
AAGAGTGCTA ATGGCAGTGT TGAAGTCCGT GGTAAAACTT TAGGTGTGAT TGGTTATGGT
CATATTGGTA CTCAATTGGG TATTTTGGCT GAAACCTTAG GCATGAGAGT AATTTTCTTC
GATATTGAAG ATAAGTTACC GTTAGGCAAT GCCTCTCAAG TTCACTCTAT GGACAAGTTA
TTGGCTCAAG CGGACGTTGT CAGTCTGCAT GTACCAGAAA CACCGCAAAC TAAAGATATG
TTCGCTAAAG CTGAATTTGC TCAAATGCGT CAAGGCAGTT TCTTTATCAA TGCTTCTCGC
GGAACCGTAG TTGATATTGA AGACTTAGCC AATGCACTGA AGTCAGAACA TCTTGCGGGT
GCAGCGATTG ACGTATTCCC TGTTGAACCT AAGTCGAATG ATGATGAATT CATCTCTCCA
CTACGCGGCT TAGACAATGT ATTACTCACA CCGCACATTG GTGGCAGTAC TGCTGAAGCA
CAGGAAAACA TCGGCGTAGA AGTGGCAGGT AAGCTGGTCA AATACTCAGA CAACGGCTCG
ACTCTGTCTG CGGTTAATTT CCCTGAAGTG TCTTTAGCGC AACATAGTGG CACCTCACGC
TTATTGCACA TTCACCAAAA CCGTCCTGGT GTATTGATTA AAATTAACCA AGCGTTTTCT
GAAAAAGGCA TTAACATTGC TGCTCAGTAC TTACAAACTA CCGCTGAAAT TGGTTACGTG
GTAATGGAAG TAGATTCAGA TCAAGCTGAA GAAGCATTAG TTGAATTAAA GTCTATTGAA
GGCACTATCC GTGCGCGGGT ATTGTTTTAA
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| Protein sequence | MAKHSLDKDK IKILLLEGVH QTAVDVLERA GYTNIEYHKA SLGEEALLAS IKDAHFVGLR
SRTQLTAEVL HHAEKLVAIG CFCIGTNQVD LASAEKLGIP VFNAPFSNTR SVAELVIGEI
IMLMRGIPQR NAMSHRGGWL KSANGSVEVR GKTLGVIGYG HIGTQLGILA ETLGMRVIFF
DIEDKLPLGN ASQVHSMDKL LAQADVVSLH VPETPQTKDM FAKAEFAQMR QGSFFINASR
GTVVDIEDLA NALKSEHLAG AAIDVFPVEP KSNDDEFISP LRGLDNVLLT PHIGGSTAEA
QENIGVEVAG KLVKYSDNGS TLSAVNFPEV SLAQHSGTSR LLHIHQNRPG VLIKINQAFS
EKGINIAAQY LQTTAEIGYV VMEVDSDQAE EALVELKSIE GTIRARVLF
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