| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0554 |
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| Symbol | |
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| ID | 4278722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 641432 |
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| End bp | 642619 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133312 |
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| Product | hypothetical protein |
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| Protein accession | YP_749253 |
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| Protein GI | 114561740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5621] Predicted secreted hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.817301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCTG TTACCTTTAA AGGCATATAC TCCATCGCTT TCAAGTTTGT ATTACATACC
AAGTTTACAA CACGGCAAAC ACAATGGATG CTCCTTTTAG CATTGCCTCT GTGTGCAATG
TTAACAGCCT GCTCACCTGC GCAAGATAGC GTCACAAAAG AGTCAACAAT TAGTAGCATG
TCATCTGCAT CAGCTGAAGG TTATAGCGAA GTCACTCAAG GTAAAACCTT ACACTTTCCA
CAAGACCATT TAGCGCACGA TGACTTTAAA ATTGAGTGGT GGTATTTAAC CGCAAACCTG
ACCACGGCTG CAGGTGAAGA TGTTGGCGTG CAATGGACTC AATTTCGCAT TGGAATGACA
CCACCTCAAA AATCGACAGT TGCCACCAAT GACTGGGAAA CAAATCAGCT TTACATGGCT
CATGCCGCTG TAACCACATC AAATGAACAT TTATTAGCTG AGAAATGGTC ACGAGGGCAC
CCGCAACTTG CAGGTGTAAA ATCGCAACCG TTTGAAGTGC ATCTGCAAAA CTGGCAATGG
TTAGGTCAGT CTGACAGTCT TTTTCCGGCA ACATTAAATG TGGCTAGTGA TCAGTTTAGT
TATCAATTAC AGCTAAATAG TCAGCAACCG CTGCAATTAC AAGGTGATAA AGGTTATAGC
AGCAAAAGTG CAGACCAAAG CGTAGCGTCT TACTATTACA GCCAGCCTTT TATCGACGTA
ACAGGTCAAA TAACTCGTCA TGGCGTAACA GAACTAGTCA GCGGTAAAGC TTGGCTTGAC
CGCGAATGGA GTTCACAATT TTTAACCAAA GCCCAGCAAG GTTGGGACTG GTTTTCACTG
CGTTTAGACG ACAATTCAAC GCTAATGGCA TTTAGACTGC GCGGCGAAAA TGACCAAGCA
CACTTTTACA GTGCCAGAAG GATGTTTACT GATGGTAGTG GCCACAATAT TAATAGCCGA
GACAACCCTG GTGATATTGA TATGCAACCC ACTCAGTGGC AACAAACCGC ATTAGGCAAT
CATCCTATTG CATGGCGAAT TAAGATTAAT AGTGAAGCCA TCGACGTCAC GACCCAAGCT
GTTAACCCTA ACAGCGACAT GCCAGTATCT ACGTCATATT GGGAAGGCCC CATTACGATT
AAAGGCAGTC ACCAAGGTCA AGGTTACATG GAGCTTACTG GTTACTAG
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| Protein sequence | MISVTFKGIY SIAFKFVLHT KFTTRQTQWM LLLALPLCAM LTACSPAQDS VTKESTISSM
SSASAEGYSE VTQGKTLHFP QDHLAHDDFK IEWWYLTANL TTAAGEDVGV QWTQFRIGMT
PPQKSTVATN DWETNQLYMA HAAVTTSNEH LLAEKWSRGH PQLAGVKSQP FEVHLQNWQW
LGQSDSLFPA TLNVASDQFS YQLQLNSQQP LQLQGDKGYS SKSADQSVAS YYYSQPFIDV
TGQITRHGVT ELVSGKAWLD REWSSQFLTK AQQGWDWFSL RLDDNSTLMA FRLRGENDQA
HFYSARRMFT DGSGHNINSR DNPGDIDMQP TQWQQTALGN HPIAWRIKIN SEAIDVTTQA
VNPNSDMPVS TSYWEGPITI KGSHQGQGYM ELTGY
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