| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0550 |
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| Symbol | |
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| ID | 4278718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 634530 |
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| End bp | 636623 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133308 |
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| Product | elongation factor G |
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| Protein accession | YP_749249 |
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| Protein GI | 114561736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000265126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAT TATCCAAATA CAGAAACATT GGTATCTTCG CTCACGTTGA CGCGGGTAAA
ACCACGACCA CCGAGCGTAT CCTTAAGCTA ACCGGTAAGA TCCATAAGAT CGGTGAAGTA
CATGATGGTG AATCAACCAC AGACTTCATG GAACAGGAAG CTGAGCGCGG TATTACCATT
CAGTCTGCAG CTGTAAGCTG TTTCTGGAAA GATCACCGTT TTAACGTTAT TGACACTCCA
GGCCACGTTG ACTTTACAGT TGAAGTTTAT CGTTCGCTAA AAGTGCTTGA CGGTGGTATC
GGTGTATTCT GTGGTTCTGG CGGCGTAGAG CCTCAGTCAG AAACAAACTG GCGTTATGCT
AACGATTCTG AAGTTGCGCG TATCATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC
TTCTTACGTG TTGTTAAGCA AACTAAAGAC GTATTAGCGG CTAACCCATT GGTTATGGTT
TTACCAATCG GTATCGAAGA CGAATTCTGT GGTGTTGTTG ACCTACTAAC TCGTGAAGCT
CACATTTGGG ATGATTCTGG TTTACCAGAA AACTTCGAAA TTAAGCCTGT GCCAGCTGAC
ATGGTTGACA TCGTTGAAGA ATACCGTGAA ATGCTAATCG AAACTGCTCT TGAGCAAGAC
GATGCCTTAT TAGAAGCATA CATGGAAGGT GTTCAGCCAT CTATTGAAGA CGTTAAGCGT
TGTATCCGTG CGGGTACTCG TACAATGGCT GTGTTCCCAA CATACTGTGG TTCAGCATTC
AAAAACAAAG GTATGCAGTT ATTGCTAGAT GCCGTTGTTG ATTATTTACC AGATCCAGTT
GAAGTTGATC CACAACCTCT AACTGACGAA GAAGGTAACG AAAATGGCGA ATTCGCAATC
GTTGATGTTG ATGCACCTTT TAAAGCATTA GCGTTCAAGA TTATGGATGA CCGTTTTGGT
GCGTTAACTT TCGTACGTAT CTATTCTGGC CGTTTGAAGA AGGGTGACAC CATCCTTAAC
TCATTCACTG GCAAAACAGA ACGTATTGGC CGTATGGTTG AGATGCAAGC TAACGAACGT
AACGAACTTG AATCAGCGCA AGCTGGTGAC ATTATCGCTA TCGTTGGTAT GAAGAACGTG
CAAACTGGTC ACACTTTATG TGATCCTAAG CACCCTTGTA CACTAGAAGC CATGGTATTC
CCTGAGCCAG TTATCTCTAT CTCTGTAACG CCAAAAGATA AAGGCGGTTC TGAGAAAATG
GGTATCGCTA TCGGTAAAAT GATTGCAGAA GATCCATCTT TCCGTGTAGA GACTGACATT
GATTCTGGTG AAACCATCCT TAAAGGTATG GGTGAACTTC ACTTAGACAT TAAGGTTGAT
ATTCTTAAGC GTACTTACGG CGTTGACCTA ATTGTAGGCG AGCCTCAAGT TGCTTACCGT
GAAACTATCA CTAAAGAAAT TGAAGATAGC TACACGCACA AGAAACAGTC TGGTGGTTCT
GGTCAGTTTG GTAAAATTGA CTACACTATT CGCCCTGGCG AGCAAAACAC TGGCTTCACT
TTCACTTCGA AAGTGGTTGG TGGTAACGTA CCTAAAGAAT TCTGGCCTGC TGTTGAGAAA
GGTTTCAAGA GCATGATGAA CACAGGTACT ATCGCAGGTT TCCCTGTGTT AGACGTTGAA
CTTGTGCTTC AAGACGGTGC TTTCCACGCA GTTGACTCGT CAGCTATCGC GTTCGAAATT
GCTGCTAAAG GTGCTTTCCG TCAATCTATG CCTAAAGCCG GTGCACAACT TCTTGAGCCT
ATCATGAACG TTGACGTATT CAGCCCAGAT GACAACGTTG GTGACGTAAT TGGTGACCTT
AACCGTCGTC GCGGTATGAT CAAAGATCAA AACGCTGGTG TTACAGGTGT TCGTATTAAA
GCTGACGTAC CGTTATCAGA AATGTTCGGT TATATCGGTT CACTACGTAC AATGACTTCA
GGCCGTGGTC AATTCTCTAT GGAATTTGCT CATTACAGCC CTTGTCCAAA CAGCGTTTCT
GAGAAAGTTG TTGCTCAAGT TAAAGAACGT AAGGCTGCTG AAGCTAAGAA GTAA
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| Protein sequence | MTELSKYRNI GIFAHVDAGK TTTTERILKL TGKIHKIGEV HDGESTTDFM EQEAERGITI
QSAAVSCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NDSEVARIIF VNKLDRMGAD FLRVVKQTKD VLAANPLVMV LPIGIEDEFC GVVDLLTREA
HIWDDSGLPE NFEIKPVPAD MVDIVEEYRE MLIETALEQD DALLEAYMEG VQPSIEDVKR
CIRAGTRTMA VFPTYCGSAF KNKGMQLLLD AVVDYLPDPV EVDPQPLTDE EGNENGEFAI
VDVDAPFKAL AFKIMDDRFG ALTFVRIYSG RLKKGDTILN SFTGKTERIG RMVEMQANER
NELESAQAGD IIAIVGMKNV QTGHTLCDPK HPCTLEAMVF PEPVISISVT PKDKGGSEKM
GIAIGKMIAE DPSFRVETDI DSGETILKGM GELHLDIKVD ILKRTYGVDL IVGEPQVAYR
ETITKEIEDS YTHKKQSGGS GQFGKIDYTI RPGEQNTGFT FTSKVVGGNV PKEFWPAVEK
GFKSMMNTGT IAGFPVLDVE LVLQDGAFHA VDSSAIAFEI AAKGAFRQSM PKAGAQLLEP
IMNVDVFSPD DNVGDVIGDL NRRRGMIKDQ NAGVTGVRIK ADVPLSEMFG YIGSLRTMTS
GRGQFSMEFA HYSPCPNSVS EKVVAQVKER KAAEAKK
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