| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0546 |
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| Symbol | |
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| ID | 4278714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 625401 |
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| End bp | 626585 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133304 |
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| Product | hypothetical protein |
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| Protein accession | YP_749245 |
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| Protein GI | 114561732 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAC ACAGTGCTTT TATAATGTTA AGTTCTTTGG CATTAGTCAC CTTATCTACT
GCAGTTAATG CAGGGCCGCT CTCAAAAGAT GTTGAAGAGA TGCGAGTATC AAAAGCTGGG
CAAACAATGC CTAATGTGGT TAATCGTTAT CAAGCTATCA GTGATACTGT AGAGGTCAAG
TTAGCCCAAT CCACTGATGA GTTAGCGGTT ACCGAAATGG CCGCGCATCA AGGGCATAGG
TTATGGCAGC AAGCTGTACG TGATGTGCAA TCGGGACACA GTGATGATCG CTCCTTGTAC
TGGAGTCGTT TAAGTATGCG TAACGTCCTA AAGCAAGAAA AAGCTGGGTT CAATGTGGCC
GATTGGCAAC GTGATATTTT AGTCAAAGCT GTTGAAAAAT CCTCTCGCGG TTTTAGTGAT
ATTGAGTTTT CTCCCGATAC ACAAATTAAT ATTTTAGTGA CCGGTTTTGA CCCTTTTTTC
CTTGATAGAA ACATCGGCCA AAGCAATCCA TCAGGTTTAG CAGCGTTAGC ACTCGATGGC
TATCGTTTTG ACGTAAATGG TAAAAAAGCA CAGATCGAAA CGGTGATGAT TCCAGTAAGA
TATGCTGATT TCGACAATGG TATTATCGAG TCGTTACTCA CACCGTTTTA CCGTGACAAC
AGTGTCGACA TGGTATTTAC CATTAGTATG GGTCGTGAAA ACTTCGATAT TGAACGTTTT
CCTGGACGTA ACCGCAGTGC AGAAGCTCCA GACAATTTAA ATGTCTTAAC CGGTGCCAGT
CAACGTAATC CTAAAGCGCC ATTGTTTAAT AATGGAACCT CTACAGACGG CAAATTAAAT
GGCCCTGAAT TTGTGCAATT CTCTTTGCCT ATTGAAGCAA TGGCGGCAGT GAAAGGTCAT
TGGAGTGTCA ATGACAATAA TCAAATTAGC ACCTTATCTC GGGGCCAATT TAAGGCATCA
TCACTGGCAG AATTACAAAA TGAAATTTCT GTAGAAGGCT CTGGTGGCGG CTATTTATCC
AATGAAATTT CCTATCGCAG TATTTTACTT CGAGATCAAT TTAACTTGAA TTTACCGGTA
GGACACATTC ATACTCCACG TATTAAAGGC TACGACTCAC AAGTAGAGTC AGACATTGTC
GAGCAGATAC GTGCCATGAT AGCTGCAGCA GCGAGCACAC TGTAA
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| Protein sequence | MIKHSAFIML SSLALVTLST AVNAGPLSKD VEEMRVSKAG QTMPNVVNRY QAISDTVEVK
LAQSTDELAV TEMAAHQGHR LWQQAVRDVQ SGHSDDRSLY WSRLSMRNVL KQEKAGFNVA
DWQRDILVKA VEKSSRGFSD IEFSPDTQIN ILVTGFDPFF LDRNIGQSNP SGLAALALDG
YRFDVNGKKA QIETVMIPVR YADFDNGIIE SLLTPFYRDN SVDMVFTISM GRENFDIERF
PGRNRSAEAP DNLNVLTGAS QRNPKAPLFN NGTSTDGKLN GPEFVQFSLP IEAMAAVKGH
WSVNDNNQIS TLSRGQFKAS SLAELQNEIS VEGSGGGYLS NEISYRSILL RDQFNLNLPV
GHIHTPRIKG YDSQVESDIV EQIRAMIAAA ASTL
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