Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0544 |
Symbol | |
ID | 4276964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 623849 |
End bp | 624613 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133302 |
Product | deoxyribonuclease I |
Protein accession | YP_749243 |
Protein GI | 114561730 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTGT TAATTTTAGG GTTTATTTTG CGCTTATCAT CCACACACTC TTGGTTATTT GGGGTGTCGC TTCTGTGCGG CATTTTTTCA TCCACACTTA TCGCAGCAGA ACATCCAAGT AGTTTTGGTA AAGCGAAAAA AGTTGCCAAA AAGATTTACC AACAACACCT ACCTCTCAGT TCCTTTTATT GCGGCTGCGA CATCGCCATA GCAGGCAAAT TATGGCAAGC AGATCATGCT AGCTGTGGCT ATCAGGTTAG AAAACAAATT ATTAGAGCCA ACCGTATTGA ATGGGAGCAC GTGGTTCCCG CTTGGGAATT TGGTCATCAA CTGCAATGTT GGCAAGATGG CGGCCGTAAA AATTGTGGTA AAAACAACAA GCAATTCAAA AAAATGGAAG CCGATTTACA TAATCTCGTT CCTGCTGTCG GTGAGGTCAA TGGCGATCGC AGCAACTTTA GGTTTAGTGA TTGGGGTGGA AAAGCGGATC AATACGGGCA ATGTGAAATG ATTGTCGACT TTAAAGGCCG CAAAGCACAA CCGCCTAAAC GAGCAAGAGG TCCTATTGCT CGCACTTACC TTTATATGCA AAAAATCTAT GGTCTTCAAA TTAGCAGCAG TCAGCAAAAA TTGTTTAATG CATGGGACAA AATGCAGCCA GTGACGGCAA CTGAGTGCAA GCGTGATACC TTAATCGCTG CTAACCAAGG TAATCATAAT GATTTTGTAT TCAAACAATG CCAAAATAAC GGCTTAGTTC GTTAA
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Protein sequence | MFLLILGFIL RLSSTHSWLF GVSLLCGIFS STLIAAEHPS SFGKAKKVAK KIYQQHLPLS SFYCGCDIAI AGKLWQADHA SCGYQVRKQI IRANRIEWEH VVPAWEFGHQ LQCWQDGGRK NCGKNNKQFK KMEADLHNLV PAVGEVNGDR SNFRFSDWGG KADQYGQCEM IVDFKGRKAQ PPKRARGPIA RTYLYMQKIY GLQISSSQQK LFNAWDKMQP VTATECKRDT LIAANQGNHN DFVFKQCQNN GLVR
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