Gene Sfri_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0544 
Symbol 
ID4276964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp623849 
End bp624613 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID638133302 
Productdeoxyribonuclease I 
Protein accessionYP_749243 
Protein GI114561730 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTGT TAATTTTAGG GTTTATTTTG CGCTTATCAT CCACACACTC TTGGTTATTT 
GGGGTGTCGC TTCTGTGCGG CATTTTTTCA TCCACACTTA TCGCAGCAGA ACATCCAAGT
AGTTTTGGTA AAGCGAAAAA AGTTGCCAAA AAGATTTACC AACAACACCT ACCTCTCAGT
TCCTTTTATT GCGGCTGCGA CATCGCCATA GCAGGCAAAT TATGGCAAGC AGATCATGCT
AGCTGTGGCT ATCAGGTTAG AAAACAAATT ATTAGAGCCA ACCGTATTGA ATGGGAGCAC
GTGGTTCCCG CTTGGGAATT TGGTCATCAA CTGCAATGTT GGCAAGATGG CGGCCGTAAA
AATTGTGGTA AAAACAACAA GCAATTCAAA AAAATGGAAG CCGATTTACA TAATCTCGTT
CCTGCTGTCG GTGAGGTCAA TGGCGATCGC AGCAACTTTA GGTTTAGTGA TTGGGGTGGA
AAAGCGGATC AATACGGGCA ATGTGAAATG ATTGTCGACT TTAAAGGCCG CAAAGCACAA
CCGCCTAAAC GAGCAAGAGG TCCTATTGCT CGCACTTACC TTTATATGCA AAAAATCTAT
GGTCTTCAAA TTAGCAGCAG TCAGCAAAAA TTGTTTAATG CATGGGACAA AATGCAGCCA
GTGACGGCAA CTGAGTGCAA GCGTGATACC TTAATCGCTG CTAACCAAGG TAATCATAAT
GATTTTGTAT TCAAACAATG CCAAAATAAC GGCTTAGTTC GTTAA
 
Protein sequence
MFLLILGFIL RLSSTHSWLF GVSLLCGIFS STLIAAEHPS SFGKAKKVAK KIYQQHLPLS 
SFYCGCDIAI AGKLWQADHA SCGYQVRKQI IRANRIEWEH VVPAWEFGHQ LQCWQDGGRK
NCGKNNKQFK KMEADLHNLV PAVGEVNGDR SNFRFSDWGG KADQYGQCEM IVDFKGRKAQ
PPKRARGPIA RTYLYMQKIY GLQISSSQQK LFNAWDKMQP VTATECKRDT LIAANQGNHN
DFVFKQCQNN GLVR