Gene Sfri_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0526 
Symbol 
ID4278659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp600922 
End bp601575 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content44% 
IMG OID638133284 
Producthypothetical protein 
Protein accessionYP_749225 
Protein GI114561712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.378933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAT CGACTGAAAC TACCTTAGTA GGTACTGGCG CATTAATAGA GCAATTGTTG 
CGTGGTGAGT TTATTTGCCG AGTGACCAAT GAAGACGGTT GGCGGGCATT AAAAAACAAC 
AGCACTCGCG ACAGAGTTGA AACCTACCTT AACCAAATTA ATCGCACCAT TGCCAGTGCT 
GGTGAGGGTG AAGTCTTTTT TTGCGGTTAT TTGCAGCTAG GCGAGGTTGA GCGCAAAGTT 
ATTTCATCGC AATTTAAAGA TATTTGCTCA GGCCTTATTC CATTAGTGGA ATGGCTAGTA 
TTAGTGCAAG AAGCCAGTGG TCAAGATGCT CCGCTGAGCG AAGGCGCGCC GATCCGCTTA 
ACCGATTTAC AAGCGCGTAT TGAAGACACG CCAGCCTTTA GAGAGCAACT CACTAAGTTG 
AGCCATTACC GATTATTCGG TTCAAGCAGT ACTAACGTTG ACGGCCAAAT TAAGTTGGTG 
TTTAAGCGCT TAGTGGAACT GGGTTATTTA ACCAAACCCA ATAGTGAAAA ACAGATTTAT 
ATCGCCACGG GTAAGTTAGA TTATCTATAC GAAGTTATCC GCTTTATTGA TGAGACCGAA 
GGCTTAAGTC TTGAGGCTCA GGCAGAAACC GCGACCCAAA GGGACTTGAT ATGA
 
Protein sequence
MSESTETTLV GTGALIEQLL RGEFICRVTN EDGWRALKNN STRDRVETYL NQINRTIASA 
GEGEVFFCGY LQLGEVERKV ISSQFKDICS GLIPLVEWLV LVQEASGQDA PLSEGAPIRL 
TDLQARIEDT PAFREQLTKL SHYRLFGSSS TNVDGQIKLV FKRLVELGYL TKPNSEKQIY 
IATGKLDYLY EVIRFIDETE GLSLEAQAET ATQRDLI